Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02338 ATGGGTTCGCTAGAAAGATCAAAGAAGAAGGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTGTGTTTTGTGATGGGCTTTTTCACTGGTTTAGCTCCAACAGGTAAATCTTATCTCTTTTCCACCAAAGTTGCTGTTTCAAATAGGACACAGTTTGCTCCACAACCTAGTGAAATGTTACTCCACACAATAAGTGTCAATGAAAGTTTGATAGCTCCACCTCCAATCACCATGTCCATGAAGCCTGCAATCCCTGAAACTGAAAAGAAAAAAACACTTCCAAAGCTGAAGCCCAGAAGACTCATCATCATTGTGACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACCATAAAGCTTGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCAAAAACAAATTCCACAGAGCTTCCTGAGATACTGAGAAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAACTTCACTGAATTAGAAGCTGAACTGAATCACCAGAGAAATCTTGCACTCAGGCACATTGAGCACCACAGACTCAACGGCATTGTGCACTTTGCTGGCCTTTCCAATGTCTATGATCTCCAATTCTTCCATCAGCTTAGAGATATTGAGTTGTTTGGAACATGGCCAACTGCATTATTAGCTGCACATAGGAAGAAAGTGAAAATCGAAGGACCAGTTTGCGATTCATCACAAGTTATTGGTTGGCATCTGAGGAATATGAACAATGAAACTGACACAATCACTCCCCCAATTCATATTTCAAGTTTTGCATTTAACAGTTCCATCCTTTGGGACCCTGAGCGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCGATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAAGCTAAGTTAAAGGGAATTCCACCACAAGACTGCTCCAAAATCTTGCTCTGGCGTTTCAATTTTCGAGCCCGAACCACCTCAATTCACTAA 1014 0.4191 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSYLFSTKVAVSNRTQFAPQPSEMLLHTISVNESLIAPPPITMSMKPAIPETEKKKTLPKLKPRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALRHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIELFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPQDCSKILLWRFNFRARTTSIH 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02338 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 103 337 IPR029044 -
Vian2g02338 337 Pfam Glycosyltransferase family 43 124 328 IPR005027 GO:0015018|GO:0016020
Vian2g02338 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 102 332 IPR029044 -
Vian2g02338 337 FunFam Glycosyltransferases 102 337 - -
Vian2g02338 337 CDD GlcAT-I 102 331 IPR005027 GO:0015018|GO:0016020
Vian2g02338 337 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 334 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02338 Vian-Chr2 43756473 43758332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02338 1 333 Glycosyltransferase AT2G37090 61.318 2.84e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02338 K20869 - gmx:100785607 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02338 2 43756473 43758332 Vian2g02338 2 43756473 43758332 ECH