Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02292 ATGAGAGACAGACAGGACCTTACCCAGTACAAAGTTTCCCCTGGCCGTTGGATCAAGTACGGTTCAAAGATGATAGGTGTACGGTTAAGATTGGAGTGTTTCAAGTCATCAGCAATGAAGACAGAGTCGAAGAAGTTATCCAAGTCTTCGTGGCCTAAATTAACCATGAGGAAGTGGCTCAATACGAAGAACGGTGCTGAGAAGTTTCAGTCAGACTACGATGCAACAGCAACTGCGATGGAAAGAAGAAAGAGTTTCTCAGACGAAGATCGTTACGTCGCCGTACCGGATGATGATTTCTCAGAGGGGAAGAGTGGAATGAAAGGTTTGGTGCTTGGGAAGCAATCAAGTCCTGAAAGTGGCACTGGAGCTCTGAACCTTAGGATGTTCGTGGGAACGTGGAATGTGGGAGGGAAATCACCCAAGGAAGGTTTGAGTTTGAGGAATTGGCTCACGTCTCCTTCCGACCCTCACATCTATGTAATTGGGTTCCAAGAAATCGTACCGCTAAATGCGGGGAACGTACTTGGGCCGGAGGACAGTGGCCCAGCGGCGAAGTGGTTGGGCCTTATGCATGAAGCCTTGAACACCAACAACTATGACGATGATGAGAACAATGGTGACCACGACCTCAAATGTAGGCAAAGTTTTTCAGATTTTGTCCCTTTAGATGGTGAGTTGGATAATGGAGAAAAGTTTCCTAAGACTCCACGACGCTATTGCTTAGCAGCAAGCAAGCAAATGGTTGGTATTTTCTTGTGCGTGTGGGTTCGAGCGGATCTTTGCACCCATGTTTCCAATTTGAAAGTGTCCTGTGTTGGCCGAGGCATCATGGGTTATCTTGGAAATAAGGGTTCAACATCGATTAGCATGACATTGTACAACACCACGTTCTGCTTCGTTTGCACCCACTTGGCTTCTGGGGAGAAATTTGGTGACGAATTGCGAAGAAACTTGGACGTCTCGGAAATCTTGAAGAAAACCAAATTTTCTCACTCCTTTAAATCTCTTCCTCATTCTCTCCCTCCTGAAAGTATTTTGGAACACGATAATATTATTTGGCTTGGCGACTTGAATTATCGACTAGCTGCTGGCTATGAGGACACACATGAACTACTAAAGAAGAATAATTGGCAGGCATTACTGGAGAAGGATCAGCTAAGGATAGAGCAGAGGGCTGGTCGAGTATTCAAAGGTTGGAATGAAGGGGACATATACTTTGCTCCTACTTACAAATACTTGACCAATTCTGATCACTATGTTGCCCAATCTTCCAAATCCAGGGAAAAACGACGAACTCCTGCTTGGTGCGATCGAATTCTTTGGAAAGGAGAAAGTCTGAATCAGATGTGGTATGTTCGGGGAGAGTCCAAGTTCTCAGACCACAGGCCAGTTTATTCACTATTCTCTGTTGAAGTGGACTTGACGAGCAAATATCGAGTTCCCAGGTCCTGTACGTTAAAACCCTTGACAAGTACTGCGTTGTCATCAACTAGTGCTGCTAAAGTCCAAGCAGAAGAGCAACTCTTCCTGCTAACGAGAGCTCAAAGTTGCATCGACACAGTTCCCAGGTTTTAA 1578 0.4544 MRDRQDLTQYKVSPGRWIKYGSKMIGVRLRLECFKSSAMKTESKKLSKSSWPKLTMRKWLNTKNGAEKFQSDYDATATAMERRKSFSDEDRYVAVPDDDFSEGKSGMKGLVLGKQSSPESGTGALNLRMFVGTWNVGGKSPKEGLSLRNWLTSPSDPHIYVIGFQEIVPLNAGNVLGPEDSGPAAKWLGLMHEALNTNNYDDDENNGDHDLKCRQSFSDFVPLDGELDNGEKFPKTPRRYCLAASKQMVGIFLCVWVRADLCTHVSNLKVSCVGRGIMGYLGNKGSTSISMTLYNTTFCFVCTHLASGEKFGDELRRNLDVSEILKKTKFSHSFKSLPHSLPPESILEHDNIIWLGDLNYRLAAGYEDTHELLKKNNWQALLEKDQLRIEQRAGRVFKGWNEGDIYFAPTYKYLTNSDHYVAQSSKSREKRRTPAWCDRILWKGESLNQMWYVRGESKFSDHRPVYSLFSVEVDLTSKYRVPRSCTLKPLTSTALSSTSAAKVQAEEQLFLLTRAQSCIDTVPRF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02292 525 SMART i5p_5 125 477 IPR000300 GO:0016791|GO:0046856
Vian2g02292 525 Gene3D Endonuclease/exonuclease/phosphatase 115 491 IPR036691 -
Vian2g02292 525 SUPERFAMILY DNase I-like 126 474 IPR036691 -
Vian2g02292 525 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 56 486 IPR045849 GO:0004445
Vian2g02292 525 Pfam Endonuclease/Exonuclease/phosphatase family 132 462 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02292 Vian-Chr2 43253054 43258505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02292 126 473 Acyl Lipid Metabolism Gene Families AT1G65580 29.471 3.13e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02292 - - vun:114176714 874.004