Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02269 ATGGAGGAAGCGCTGGAACTGTCACGCGCTAAGGACACGAAGGAGAGGATGGCGGGCGTGGAGCGCCTCCACCAACTTCTGGAAGCTTCCAGAAAGAGCCTCTCGTCTTCCGAGGTGACTTCGCTCGTCGACACTTGTATGGATCTCTTGAAGGACAATAACTTCCGCGTCTCGCAGGGCGCGCTGCAGGCGCTCGCCTCCGCCGCCGTCCTCTCCGGCGACCACTTCAAGCTTCACTTCAACGCACTCCTCCCCGCCGTCGTCGACCGTCTCGGCGACGCCAAACAGCCTGTTCGAGACGCCGCCAGGCGCCTCTTGCTCACTCTCATGGAGGTTTCTTCTCCAACTATAATTGTTGAAAGGGCAGGATCCTTTGCTTGGGCACATAAAAGCTGGAGAGTTAGAGAGGAGTTTACGCGAACTGTCACAGCTGCAATTAATTTATTTGCGTCTACTGAGCTCCCACTTCAACGGGCTATCCTTCCCCCTGTTTTGCATTTGCTTAACGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAAGAAATGTATACACAAGCTGGGCCTCAATTTCGTGATGAACTTCACCGTCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTTGAAGGAATTCAGCCAAAAGTTCGCTCTTCAGATGGTATTCCAGGTGGATATATTACTGGGGAAATTAAGCATTTGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCCAGGGAGACCTCTCTTTTCGGAGGGGAAGGTGACATCACTGAGAAACCCATAGACCCTGTGAAGGTATATTCAGATAAGGAGTTAACCAGGGAAATTGAGAAGATTGCATCTACTCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTATAGGAGGTGCTACTGATTATCCATGTTTTCGTGGGCTCTTGAAGCAACTTGTTGGACCTTTAAACACACAATTGTCAGACCGAAGATCTAGCATTGTGAAGCAGGCCTGCCATCTATTGTGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAAGCATGTGCCGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGTTGCGCAACTGCAAAGTTTCTCGGGTTCTTCCCCGTATAGCTGATTGTGCAAAAAATGATCGCAATGCTGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTGGAACATTGGCCTGATGCACCAGAAATACATCGATCCGCTGATTTATATGAGGATATGATAAAGTGTTGTGTTTCAGATGCAATGAGTGAGGTTCGATCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGATCGCGTCGTTTATTTGCATCCTTTGACCCTGCCATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATACATCGGCGACATGCTTCACCTTCCATTCGAGATAGAGGGGCACTGACGTCATTGGCTAGTCAGACATCGGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCGATGGATAGAAGTTCAAGTATATCATCAGGGACATCTATCTCCTCTGGTATACTTCTATCACAAGCTAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAGAGCATGTTACATGCAAGCAAGCAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCATCTTTCCGGTCATCGAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCTGCTGTCTCCGCATCTAATCATCTGACAAGCTCTTTAACAACAGAATCAACTACTTCTGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTTGGTTTGTCTGACATAATCACCCAGATTCAAGCTTCAAAGGATTCTGCCAAGTTGTCCTATCATAGCAATGTTGGTATTGAACCTTTATCATCAATATCATCATATTCGAGTAAAAGGGCCTCTGACAGATTACAAGAAAGAAGTTCACTTGATGATAACAGTGATATTAGGGAGACTAAGAGATTTATAAAACCCAACCACGATAAGCAGTATTTGGATGCCCCTTATAGAGATGGGAACTTTAGGGAATCACATAATAGTTATGTTCCTAATTTCCAGAGACCGCTTTTGAGAAAGAATGTGGCTGGACGCATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAATCAGCTATCTCTTGGAGAGATGCCAAACTATGCAGAAGGACCCTCATCTCTTCACGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGGCCCAAGGGAGTTATTGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAAGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGCATGCCGAAAGCCTTTTGAAGGTTACATGGAGAGAATATTACCCCATGTGTTTTCTCGGTTAATTGATCCTAAAGAACTTGTCAGGCAGCCATGTTCAACAACTTTGGAAGTTGTGAGCAAAACTTACAGTATAGATTCTCTTTTACCGGCATTATTACGCTCGCTAGATGAACAGAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCAATCAATTCCTTTAACAAACATGCTATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTAACCCCTTTGGTTCATGACAAAAATACGAAGCTTAAAGAAGCAGCCATTACATGCATTATATCAGTGTATTCACACTTTGATTCGATTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCTTTAAAACAATATACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAGAACAAGAAAGAAAGACAACGTTCTAAGTCTTCCTATGATTCATCTGATGTGGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAGGCTCATTACCTTGGAAGGTATTCTGCTGGATCCCTTGATGGTGATGGTGGCAGGAAATGGAGTTCCCAGGATTCAATACTAGTGAAAGCTAGTCTTGGTCAAGCATCATCTGGTGAAACTCAGGAACATCTGTATCAAAATTTTGAAACTGATCCTAATACTGGCAGTCTTGCTTCAAAAACTAAAGATCTTGCATATGCAGTCAATCCAATGGGTCAAAACCTTGCCTCTCAATCTAGCCAACATAGAAATGTGGACAGTAGCATAAACTTGGATGGTCTTTCAACTCCTCGTCTAGATGTAAATGGTTTGATGTTATCTGAGCATTTAAATGTTGCGGAAGGCTATGTAAATGACAAAGAACATTCTTCTGAATTGGCACTTAATCATCACACAGCCGAAGATGTAAAGATTAACTCCATAACAGAAACAGGACCAAGCATTCCTCAAATTCTTCATATGGGGATCATGGTATGCAGTGGGGGTGATGGAAGCCCTGTTTCAAGTAAACGAACTGCACTTCAACAATTAGTTGATGCTTCTATATCAAATGATCATTCTATTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTACTGGATGATTCAGATTCCTCGGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAGATGCTTAAAAATCAGAAAGGCGACATGGAGAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCACGTTACTAAAGATATCATTCCTAAGGTCTCCAATGAAGCAGAGCACTGCTTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTGCTGGTTACTGAGGATGAGAAAACACTTGTCATTTGCATAAATTGCTTAACAAAGCTTGTAGGGCGGCTTTCTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTGCCCGCTCTTTTTGAAGCCTTTGGTAACCAGAGTGCAGATGTTCGTAAGACCGTTGTTTTCTGCCTTGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCGTATTTGCAAGGGCTTAACAGCACGCAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAAAACAATTGATACCGTTCAAGATTAG 4347 0.4288 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPGGYITGEIKHLSVNPKKSSPKAKSSSRETSLFGGEGDITEKPIDPVKVYSDKELTREIEKIASTLVPEKDWSIRIAAMQRVEGLVIGGATDYPCFRGLLKQLVGPLNTQLSDRRSSIVKQACHLLCFLSKDLLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVSRVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFASFDPAIQRLINEEDGGIHRRHASPSIRDRGALTSLASQTSAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSFRSSSLDLGVDPPSSRDPPFPAAVSASNHLTSSLTTESTTSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYHSNVGIEPLSSISSYSSKRASDRLQERSSLDDNSDIRETKRFIKPNHDKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSLGEMPNYAEGPSSLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGVIEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDSSDVVGTSSEDGYVGYSRKAHYLGRYSAGSLDGDGGRKWSSQDSILVKASLGQASSGETQEHLYQNFETDPNTGSLASKTKDLAYAVNPMGQNLASQSSQHRNVDSSINLDGLSTPRLDVNGLMLSEHLNVAEGYVNDKEHSSELALNHHTAEDVKINSITETGPSIPQILHMGIMVCSGGDGSPVSSKRTALQQLVDASISNDHSIWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGDMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKTIDTVQD 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02269 1448 SUPERFAMILY ARM repeat 292 1438 IPR016024 -
Vian2g02269 1448 Gene3D - 1 221 IPR011989 -
Vian2g02269 1448 Gene3D - 1231 1440 IPR011989 -
Vian2g02269 1448 SMART TOG_3 780 1029 IPR034085 -
Vian2g02269 1448 SMART TOG_3 282 514 IPR034085 -
Vian2g02269 1448 SMART TOG_3 3 224 IPR034085 -
Vian2g02269 1448 SMART TOG_3 1210 1440 IPR034085 -
Vian2g02269 1448 MobiDBLite consensus disorder prediction 243 267 - -
Vian2g02269 1448 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Vian2g02269 1448 MobiDBLite consensus disorder prediction 633 660 - -
Vian2g02269 1448 Gene3D - 267 506 IPR011989 -
Vian2g02269 1448 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Vian2g02269 1448 PANTHER CLASP 32 1434 - -
Vian2g02269 1448 SUPERFAMILY ARM repeat 7 402 IPR016024 -
Vian2g02269 1448 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Vian2g02269 1448 MobiDBLite consensus disorder prediction 696 718 - -
Vian2g02269 1448 MobiDBLite consensus disorder prediction 246 261 - -
Vian2g02269 1448 Pfam CLASP N terminal 802 992 IPR024395 -
Vian2g02269 1448 Pfam CLASP N terminal 284 500 IPR024395 -
Vian2g02269 1448 Gene3D - 796 1020 IPR011989 -
Vian2g02269 1448 MobiDBLite consensus disorder prediction 701 718 - -
Vian2g02269 1448 FunFam Protein peg1 266 513 - -
Vian2g02269 1448 MobiDBLite consensus disorder prediction 609 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02269 Vian-Chr2 42940360 42952557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02269 K16578 - gmx:100820523 2617.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02269 2 42940360 42952557 Vian2g02269 2 42940360 42952557 ECH