Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02263 ATGTCCCGTGCCTGTGAAAATACCGTTGTTGTGGGGTGTGGAGCGGTGTCGGTGGATTTCTTGGCTATTGTTGCTGCATATCCAAAGCCAGATGAAAAAATCAGAACCACTTCCTTCAAGGTTCAAGGAGGTGGCAATACAGGCAATGCCTTAACCTGCGCCTCTCGCTTAGGACTCAAACCAAGAATAATTTCCAAGGTTGCCGATGATACTCAAGGCAGGGAAGTATTACGTGAGCTAGAAGCCGATGGGGTAGATACATCCTTCATGGCTGTTTCTCTGGAGGGCACTTCACCTTTTACGTATGTCATTGTGGACAGCCAAACTAAGTCCCGTACTTGTATTCATACCCCAGGATATCCACCAATGAAGCCAGTTGATCTTCCCAAGTCAAGTTTGTTAACTGCATTGCATGGGGCAAAAATTGTTTATTTTGATGGAAGATTGCATGAAACGGCTCTAGTTGTTGCACATGAGGCAGTTAAGAAGAATATACCTATCTTAATGGACGCAGAAAGGCTGAGAGAAGGGTTGGATGATATACTGAAATTAGCAGATTATGTTGTGTGCGCTGCACAGTTTCCACAGGCATGGACAGAGGCATCAACAGTTCCTAAAGCATTAGTTTGTATGCTTTTAAGGTTGTCCAACATCAAATTTGTGATTGTAACTTTGGGAAAAGATGGTTGCATAATGCTCGAGAGAAGTTTTAATGAGGGCCCTTCCACTGAAGAAATGGAAGTTGACCGATTACTGGAATCCCTGGAGACGAGAAAGAACAGAAGCTCGCACATCCCAACCTGCATAACATCATCAGTGACAAAATTGCATGCAGAAGGTATAGGAACAGTTTGTGGTAAGTTATACGTTGGAACAGCTGAGAATGTACCTCCATCAGAGCTCATTGATACAACTGGTGCTGGAGATGCATTTATTGGATCTGTTCTCTATGCGATCTGTGCAAACTTCACGCCAGAGAAAATGCTGTGTTTTGCTGCCACTGTGGCAGCTTCCAAGTGCAGAGCTATAGGAGCAAGAACTGGTCTGCCTTACCACACAGATCCACGCCTGGCAACCTTCATGAAATAG 1089 0.4454 MSRACENTVVVGCGAVSVDFLAIVAAYPKPDEKIRTTSFKVQGGGNTGNALTCASRLGLKPRIISKVADDTQGREVLRELEADGVDTSFMAVSLEGTSPFTYVIVDSQTKSRTCIHTPGYPPMKPVDLPKSSLLTALHGAKIVYFDGRLHETALVVAHEAVKKNIPILMDAERLREGLDDILKLADYVVCAAQFPQAWTEASTVPKALVCMLLRLSNIKFVIVTLGKDGCIMLERSFNEGPSTEEMEVDRLLESLETRKNRSSHIPTCITSSVTKLHAEGIGTVCGKLYVGTAENVPPSELIDTTGAGDAFIGSVLYAICANFTPEKMLCFAATVAASKCRAIGARTGLPYHTDPRLATFMK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02263 362 CDD ribokinase_group_B 9 351 - -
Vian2g02263 362 Gene3D - 9 347 IPR029056 -
Vian2g02263 362 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 5 361 - -
Vian2g02263 362 Pfam pfkB family carbohydrate kinase 13 237 IPR011611 -
Vian2g02263 362 Pfam pfkB family carbohydrate kinase 291 350 IPR011611 -
Vian2g02263 362 SUPERFAMILY Ribokinase-like 10 352 IPR029056 -
Vian2g02263 362 PRINTS Ribokinase signature 221 232 IPR002139 GO:0016301
Vian2g02263 362 PRINTS Ribokinase signature 12 33 IPR002139 GO:0016301
Vian2g02263 362 PRINTS Ribokinase signature 39 58 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02263 Vian-Chr2 42789500 42794677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02263 - - ccaj:109795876 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02263 2 42789500 42794677 Vian2g02263 2 42789500 42794677 ECH