Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02255 ATGGACTCAAAAGGAGATGCTGAACCTCAGGAGGAGAGGCCTTCATCACCAATGAGGGTCCTGCAGCATTTTTCTGGGGGCGCATTCAAAGTTGCTGGGGAAGCATTGCATATGTCACCAATGGGGCCTGGTGGGCATAGACGTTGTCAAAGTGAGCTTGGTAGCAGAGGAGTTGAACGTAATAACAGCTTGCAGAAATTAAAATCTCACGTGAACAAGGCTTGGCGCTGGGGTGGCAAATCCCGCGAAGATGCCCTCGCGAATTTCAACCCCGAGGTCATGGCAAACCAGAAACGGCAGTGGTATCAGCTTCATCCTAAAAGTCTGGATTGTGTAAATAATAAGGAGCCGACATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGCCGTGGAGCATTCATTTGCAAGAAGGAAAAAGTGGGAAAAGGATAAGGGGAAACCTGAATTTCGAGATTGCAGAAAGTCTCAGCAGCAAAAAGTAATAGAACCAACTTTGGAACCTCAGTTATTGTTCAAATATCCTCCTGCAAAGAAGCTAACATTGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTTAGTGAACTAAACGAACTTGTCTATGGACAGGAACATTTAGGAAAAGATGATCTTTCATTCGTCTTTGCTGTCAAGGCAGCAGACAATACAACACTTTATGGAGTTTGTTTACATGTGCCTGAAATTGTTCAAAGGCCCCCTGGTATCTTAGGCATATCATCTCCTTTTTCTCATCCCTCCATGGGATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGCTATTGTCTTCTGACTAGAGTTCCCTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGCCTGAATCGGATAACAGAGTTTATAAATGAGATGAGTCTCAGTGGCAGCGTTCCATCATCTCCCAAACTAGATGATCAAATGAGGTCAAAGGAGGAAAAATCCCCAGAGAACGAGACATTCAGTGAATGGATGGATTCTGCAATTCCTCTTGATGGTGCAGCAGCTATTGCTGCTGCAGCTGCTGGGATTATATCAGATGATGAAAGCCAACAGTTATCACCTAAAATACGGGATTATCGCTGTCAATCTCCTGTAAGTGGGAGTGCCAGTGATGCTTCAGATTCGTCTCAGTTCAGGGATACAGATAAGGAGGACAGGAAGAATCTCCAAGTTCTAGATAATTGTGAGTTTAAGGCACCAGAAACTCTTGGTTCTATAAAAAGAATGCATGGAAATTGCAAAAATGACCAAGCTTCTCCGAAACCTGGAACACCTTTGTCTTCTCAGACTCGTGTCTTGGAGCGTCTTGGAAGTTTTGAATCACTTTTCAGTCCAGTTAGAAGCAGGGCATCAGAAGATGAGGACGATTTTTTCTCAAACAACGAAAGAGATTATGGGGATGAATTGTTAATGGAATGGGCTACGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATACCATGCTCAACCTATTCCACCTCGAGGAAGTGATTTTGTCTTCCACCCTCTCGAACATCTACAAGCTATTCAGTACATACGACATTCAGTTGCTGCTCTTGGCTTCGGAGATGATTGTTCAAACTGTTCTGAAACAGCTCTGGACAATACGAAGCTGGCAGCGGCTGAGGAAGCCCTATCATTATCAGTATGGACAATGGCGACTACATGTCGAGTTCTCTCCCTTGATAGTGTGATGACATTGATTACAGGAGTGTTGTTGGAAAAACAGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATACCCATGATTCGTCCGTTTCAGTGGCAGAGTTTATTGCTCCCAGTTTTACCTGGGACAATGATGGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGATTACTTGAATGCGAGAACTACTAATCGTGTTCTTGTTGATGTACAGAAGGACAAGGTGACAATGTGTCCATTACCAAAACTTCCACAGCATAGAGAGCTTTTCTCTCAGTTGAGTTCAATTCATGCTAGACTTTCAAATCAACGATCAATTGCTAAAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCCGAAGCTGCAACTCAGTTTTTGAATATATTGTGGCACTATTTGGAGTCTCTTTGTTTAAATCTGAAATCCCACACGATAACTAATGTACAATCTAATAAAGATAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTCCTAGGGATCAACCTTTCATTAAGCTTTTTGTAGATACACAGCTCTTCACTGTTTTATCAGACTCTCATCTGTTAGACATGTTTGTTGTCACTGTTGAAGATATAGCTCTTGATTTCATGGGAGGAACACCTCCAGTTCAGACCAGATGA 2469 0.4281 MDSKGDAEPQEERPSSPMRVLQHFSGGAFKVAGEALHMSPMGPGGHRRCQSELGSRGVERNNSLQKLKSHVNKAWRWGGKSREDALANFNPEVMANQKRQWYQLHPKSLDCVNNKEPTSLFEHFVIVGLHPDANLEAVEHSFARRKKWEKDKGKPEFRDCRKSQQQKVIEPTLEPQLLFKYPPAKKLTLRMKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFAVKAADNTTLYGVCLHVPEIVQRPPGILGISSPFSHPSMGCSRFLVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITEFINEMSLSGSVPSSPKLDDQMRSKEEKSPENETFSEWMDSAIPLDGAAAIAAAAAGIISDDESQQLSPKIRDYRCQSPVSGSASDASDSSQFRDTDKEDRKNLQVLDNCEFKAPETLGSIKRMHGNCKNDQASPKPGTPLSSQTRVLERLGSFESLFSPVRSRASEDEDDFFSNNERDYGDELLMEWATENKNDLLQIVCRYHAQPIPPRGSDFVFHPLEHLQAIQYIRHSVAALGFGDDCSNCSETALDNTKLAAAEEALSLSVWTMATTCRVLSLDSVMTLITGVLLEKQGVLSATVLSLIPMIRPFQWQSLLLPVLPGTMMDFLDAPVPYIVGIQHKPDYLNARTTNRVLVDVQKDKVTMCPLPKLPQHRELFSQLSSIHARLSNQRSIAKKHPVHRCNEVQAEAATQFLNILWHYLESLCLNLKSHTITNVQSNKDRVSLLLKDSFIDSFPPRDQPFIKLFVDTQLFTVLSDSHLLDMFVVTVEDIALDFMGGTPPVQTR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02255 822 MobiDBLite consensus disorder prediction 439 460 - -
Vian2g02255 822 SMART uDENN_cls 117 254 IPR005113 -
Vian2g02255 822 Gene3D - 108 332 - -
Vian2g02255 822 SMART DENN_cls 283 677 IPR001194 -
Vian2g02255 822 Gene3D - 582 739 IPR043153 -
Vian2g02255 822 MobiDBLite consensus disorder prediction 325 353 - -
Vian2g02255 822 Pfam DENN (AEX-3) domain 584 676 IPR001194 -
Vian2g02255 822 ProSiteProfiles Tripartite DENN domain profile. 157 803 IPR037516 -
Vian2g02255 822 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 55 793 - -
Vian2g02255 822 MobiDBLite consensus disorder prediction 336 351 - -
Vian2g02255 822 MobiDBLite consensus disorder prediction 392 417 - -
Vian2g02255 822 Pfam uDENN domain 175 253 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02255 Vian-Chr2 42710412 42726031 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02255 - - gmx:100791254 1291.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02255 2 42710412 42726031 Vian2g02255 2 42710412 42726031 ECH