Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02240 ATGCTGCTAAGAAGCTCTTCAACGCCAGTTCTTGGATCCCTCCTTTCCAACTTCACAGATAGTCCTAACAACAGTATTCACTCAGAAACCAGCCATGCAATCAAGCACTTTCCACCAACCGGCGTTCCGCAACATTATCACAAACTTCATGTCCCCCAAACTGGGTCCTTCACTCTCCCTTCCTTCTCATGTGGTTCTTCCCCAATCTCTCCCTCAATTGGTGAGCTTGAAAGGAAAAACAAAGGCTTTAGAAGAGTTCAATCTGATGGGAACTTGCAAGACTTAGCCTACTCCTGCAACAACGAAGACATTATGGAATTTTCAGACCCTTCCAAGAGGTTTCCAACGAGGAACAGGTGCTTGGTGCTGGAGACAATTCCTTCTTTCTCGCTTGGTAAGCACAGCGGCTTGCGTCTAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGTGAAGAAGGGGAGGAGAAGGGGGTAGAGGGGTTGAGTGTGGTGAATGGTGTGATATTGAGTGAAGCTTGGAAAGCGAAAGATGGCGTTTGCAGAGTGAGTTTCGGTGAGCAGGAAGAGGTTGGTGGTAAAGAAATGTATCTTGCAAAGGGGCTTGGGGTAGAGTGCTGTGGGGATGGCATAGGTGGCTGCATAGGGGGTGGTGGAGGTAGTAGTGATCACAATCCTTTGGGTTCTGGTGGGAATGATGGAGATAGGCATGATGTGGAGGAGTATTACAAGAAAATGGTGAAAGAAAATCCAGGGGATCCTTTGTTTCTCAGGAATTATGCTAATTTTTTGTATCAGTGCAAACAGGATCGTGAAGGAGCAGAGGAGTACTATTCTCGTGCCATACTGGCAGACCCAAATGATGGAGATGTTCTATCACAGTATGGGAAGCTGGTTTGGGAGGTACACCATGACCTAGAACGTGCCTCCGGCTATTTTGAAAGAGCAGTCCAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCTAGTTTCCTTTGGGACGCAGAGGAAGAGGAAGATGGTAACAATGAAGCACAGTGTTTGCCGCCTCATTCTCATCAAGGAGCTATGGCTACAGCAGGTGCTTGA 1092 0.4734 MLLRSSSTPVLGSLLSNFTDSPNNSIHSETSHAIKHFPPTGVPQHYHKLHVPQTGSFTLPSFSCGSSPISPSIGELERKNKGFRRVQSDGNLQDLAYSCNNEDIMEFSDPSKRFPTRNRCLVLETIPSFSLGKHSGLRLEEEDEEMESESEEGEEKGVEGLSVVNGVILSEAWKAKDGVCRVSFGEQEEVGGKEMYLAKGLGVECCGDGIGGCIGGGGGSSDHNPLGSGGNDGDRHDVEEYYKKMVKENPGDPLFLRNYANFLYQCKQDREGAEEYYSRAILADPNDGDVLSQYGKLVWEVHHDLERASGYFERAVQASPEDSHVHAAYASFLWDAEEEEDGNNEAQCLPPHSHQGAMATAGA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02240 363 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 337 - -
Vian2g02240 363 MobiDBLite consensus disorder prediction 137 157 - -
Vian2g02240 363 SUPERFAMILY TPR-like 233 340 IPR011990 GO:0005515
Vian2g02240 363 Gene3D Tetratricopeptide repeat domain 231 347 IPR011990 GO:0005515
Vian2g02240 363 SMART hat_new_1 303 335 IPR003107 GO:0006396
Vian2g02240 363 SMART hat_new_1 268 300 IPR003107 GO:0006396
Vian2g02240 363 SMART hat_new_1 233 265 IPR003107 GO:0006396
Vian2g02240 363 MobiDBLite consensus disorder prediction 340 363 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02240 - - gmx:100788436 501.516