Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02238 ATGGAAGCCAGTGGAAATATGGATCTTGCAAATAATGTTCTTGCCCGAGCCACCCAAGTCTTTGTTAAGAGACAACCGGAGATACATCTTTTTTCTGCGCGGTTTAAGGAGCAGAATGGAGATATAGAGGGTGCTAGAGCTGCCTATCAGCTTGTGCATACTGAAACTTCCCCTGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACGCCGATTGGGAAAAATGGAGGATGCCTTCTCCTTGTATGAACAGGCCATAGCTATTGAGAAAGGAAAAGAACATTCACAAACATTACCGATGTTGTTTGCTCAGTATTCTCGATTTGTTTATTTGGCTTCTGGGAATGCAGAGAAGGCAAGACAGATTTTAGTTGAGGGGCTGGAGAATGTTTTGTTGTCAAAACCAGTTCTCGAGGCCTTATTGCATTTTGAGGCTATTCAACCCTTTCCAAAGCGAGTTGATATCGACTTTCTGGAGTCATGGGTTTGCAAATTCATAATGCCTAACTCAGAGAGTCCTAGTGTAGCTAGTGCAATTGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTGAATCTCTTTGGAGATGTTCAATCAATCAAGAGAGCAGAGGATATGCATGCCAAATTGTTTTTGCCACACAGAAGCATGTCAGAGTTGAAGAAACGTCATGCTGAGGATTTCTTAGCTTCAGACAAAGTTAAAGCGTCAAGAACTTATTCTGCTCAATCACCTGCCCAATCCGTGATTGGTGCGTATCCAAATGCACAAAACCAATGGACTAATTATGGAGTACAACCTCAAACTTGGCCTCCGGTTACACAAGCACAGGGGCAACAGTGGACTGCTGGCTACACCCAGCAGGCTTCTTATGGGGCTTATGCTGGATATGGCGGCAATTATGCAAATTCTCAATTGCCCGCATCAGTTCCACCGAGTACTGCATACGGGGCCTATCCTCCTTCTTATCCTGCACAGCCGGCGGTTCCTCAACAGCCCTATGCGCAACCTGTTGCAGCCCCTGCACAGCAACCTGCTGCAGTTCCTCAAGCCTATTACGGTAGTTATTACTGA 1083 0.4506 MEASGNMDLANNVLARATQVFVKRQPEIHLFSARFKEQNGDIEGARAAYQLVHTETSPGLLEAIIRHANMERRLGKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPVLEALLHFEAIQPFPKRVDIDFLESWVCKFIMPNSESPSVASAIEREELSSIFLEFLNLFGDVQSIKRAEDMHAKLFLPHRSMSELKKRHAEDFLASDKVKASRTYSAQSPAQSVIGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPASVPPSTAYGAYPPSYPAQPAVPQQPYAQPVAAPAQQPAAVPQAYYGSYY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02238 360 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 1 353 - -
Vian2g02238 360 Gene3D Tetratricopeptide repeat domain 1 249 IPR011990 GO:0005515
Vian2g02238 360 SUPERFAMILY TPR-like 4 218 IPR011990 GO:0005515
Vian2g02238 360 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02238 Vian-Chr2 42472589 42477973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02238 K13217 - gmx:100787373 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02238 2 42472589 42477973 Vian2g02238 2 42472589 42477973 ECH