Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02228 ATGGCGAAAAAACCGTTACTCTGCTTCTTGCTTTTCCTCCTTGCCTTTGTCATCATCGCCGGAGCCTCCTCTTCAGGCGCTGAGCTTGACTACTCCAAGCTCTCGGGCATTATAATCCCTGGCTTCGCTTCCACTCAGCTCCGAGCATGGTCCATTCTTGACTGTCCGTACTCTCCGCTTGATTTCAACCCTCTCGATTTGGTCTGGCTCGATACAACCAAACTACTTTCGGCTGTCAATTGCTGGCTTAAGTGCATGGTGCTGGATCCGTACAACCAGACTGACCATCCAGATTGCAAGTCCCGCCCTGATAGTGGTCTTTCTGGGATTACAGAACTTGACCCAGGTTATATAACAGGACCTCTTTCATCGGTTTGGAAAGAGTGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCATATGACTGGAGATTGTCGCCCGCAATGCTTGAAGAGAGGGACCTTTATTTTCATAAGCTAAAATTAACATTTGAAACTGCTTACAAACTTCGTGGTGGCCCCTCTTTAGTTTTTGCCCATTCATTGGGTAATCATGTTTTCCGTTATTTCTTAGAGTGGTTGAAGCTAGAGATTGCACCAAAACATTATAATGAGTGGCTGGATCAACATATCCATGCCTATTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAATTGAAACCATTGAAGCAACTCTTTCTGGGTTCACCTTTGGTCTTCCCATATCTGAGGGAACAGCACGGCTGATGTTCAACTCCTTTGGTTCAGCACTATGGATGATGCCTTTTTCCAAGTACTGCAGAACAGATAATAGATATTGGAAGCATTTTTCTGGGGGAAGGCATGCTGGTCAACCAACATATAAATGTGATGAGCAGGAGTTTCAGTCAAACTTTTCTGGGTGGCCAACAAAAATAATCAACATTGAAATTCCTTCAGCACATGAAATACCGGAGTCCAACTTGTCTAGCATGGAGTGTGGACTACCGACTCAATTATCATTCTCAGCTCGTGAAATATCAGATGGCACCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGATGCTACACCTGTTACAAAAATCATATCTTGGTGATCCTGTTCTTAATCCCCTTACACCTTGGGAGCGGCCACCAATAAAAAATGTCTTCTGCATTTATGGGTCTGATTCAAAGACAAAGGTTGGTTACTATTTTGCTCCTAGTGGCAAGCCTTACCCCGATAACTGGATCATTACGGATGTCATTTATGAGTTTGAAGGATCTCTAATCTCAAGGTCAGGGACTCTGGTTGAAGGGAAAATTGGACCTATAAGTGGCGATGAGACGGTGCCATATCTCTCCCTTTCCTTGTGCAAGAACTGGCTTGGACCAAAAGTGAACATAACAAGAGCGCCTCAGTCAGAGCATGATGGTTCAGATGTACAGATTAAATTGAATGTGGAACATCACCATGGAGAAGATCTTGTTCCAAAAATGACAAGATTGCCAAGAGTGAAGTACATAACATATTATGAAGATTCTGAAAGTCTTCCTGGAAAGAGGACAGCAATTTGGGAGCTTGATAAAGCAAATCACAGGAACATAGTTAGATCACCAGTGCTAATGAGGGAACTATGGCTTGAGATGTGGCATGATATCCATCCTGATGCAAAATTAGAGTTTGTAACAAAAGCTAAGAGGGGTCCTTTAAGAGACGAGGACTGTTATTGGGATTATGGGAAGGCTCGTTGTGCATGGCCTGACTACTGTGAATATAGATATGTTTTTGGGGATGTTCACTTGGGACAAAGCTGTAGGTTGAGATATACTACTGCTGAAGTGTTGTCACATTATTTGTAA 1872 0.4306 MAKKPLLCFLLFLLAFVIIAGASSSGAELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPAMLEERDLYFHKLKLTFETAYKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYNEWLDQHIHAYFAVGAPLLGAIETIEATLSGFTFGLPISEGTARLMFNSFGSALWMMPFSKYCRTDNRYWKHFSGGRHAGQPTYKCDEQEFQSNFSGWPTKIINIEIPSAHEIPESNLSSMECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRMLHLLQKSYLGDPVLNPLTPWERPPIKNVFCIYGSDSKTKVGYYFAPSGKPYPDNWIITDVIYEFEGSLISRSGTLVEGKIGPISGDETVPYLSLSLCKNWLGPKVNITRAPQSEHDGSDVQIKLNVEHHHGEDLVPKMTRLPRVKYITYYEDSESLPGKRTAIWELDKANHRNIVRSPVLMRELWLEMWHDIHPDAKLEFVTKAKRGPLRDEDCYWDYGKARCAWPDYCEYRYVFGDVHLGQSCRLRYTTAEVLSHYL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02228 623 Gene3D alpha/beta hydrolase 93 251 IPR029058 -
Vian2g02228 623 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 33 595 - -
Vian2g02228 623 SUPERFAMILY alpha/beta-Hydrolases 164 461 IPR029058 -
Vian2g02228 623 Pfam Lecithin:cholesterol acyltransferase 66 493 IPR003386 GO:0006629|GO:0008374
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02228 2 623 Acyl Lipid Metabolism Gene Families AT1G04010 76.948 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02228 - - gmx:100806466 1196.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02228 2 42370475 42379287 Vian2g02228 2 42370475 42379287 ECH