Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02223 ATGGAAGGGAGTGTCAACTGTCACCCATTGCTGAGAGGAGGTAGAAGAGAGAAAGATTACAGCCATGGCTTATCCTCTTCTCAGATGCATGTCATGGCTTCTATATGTCACACCCTCTTTCCTTTGCCATTGGAGGAAACTTCTCATGTCCCTTTCCCACATGAGGCTGCAGAGCTTTTGCGCAAGAGGGTTGTGCCAGAAGCCTTGTCCCTCGTGAATTGGGTTCTCTGGATACTGTCCTTCAGATTGGGGACACTGTTTCTCTGTGGAAGACTTTGCTTGAACTGGAAGTGGCCTTTCATCCACAACTTCTCTGAGATCTCCTTGGATAAGAGAGAAGAGATTCTCAGGAACTGGTCCAGGGAGAAGCGCTGGGTGCCCCTTCGGATAGTCTTTTTGCTCATCAAACTTGCTTTCTTCTACACTTTCTTCTCAAGGGCTGATGAAAATGGACATAATCCCGCATGGGAAGCAATTGGATACCAGGTGGACACCAAGGAAAAGTTGATACAGAAGGAGAGGCCTCTGCAAAGGGGATTAATAGAGACTATATATGAAACTCATAATACTTTGATGCAATCCCTCGCTGAAAAAGGCCTTGAAGTTACTGAAGATAAACTGCAGAATCTATACAAGGTCAAATGTGATGTTGTCATTGTCGGGTCTGGTTGTGGTGGTGGAGTTGCAGCTGCAGTTCTTGCAAACTCTGGTCAGAAAGTAATCGTCCTAGAGAAAGGAGAGTACTTTGTTTCCCATGATTATTCTTCCCTGGAAGGACCATCCATGAACGAGCTATACGAATCAGGTGGCATTCTGCCAAGTCTTGATGGGAAGATGATGATCCTAGCTGGCTCAACTGTGGGTGGAGGCTCTGCAGTAAACTGGTCTGCATGCATCAGAACACCCGATTCTGTTCTGAGGGAATGGTCGAAAAAAAAAAAAATTCCCCTTTTTGCAAGCTCTGATTATCAATCTGCCATGGACACGGTATGCAGAAGGATTGGTGTGACAGAGAAGTGCAACAAACCAGGGTTTCAGAATCAAATTCTCGTACAAGGATGTGAGAAAATGGGCTTGAAAGTAGAGTCAGTGGCTACAAATTCCTCAGCAGATCATTATTGTGGTTCATGCTGTTATGGTTGTAGGACAGGAGATAAGAAGGGCACTGACTCTACTTGGTTGGTTGACGCTGTAGGAAATGGTGCGGTGATCCTCTCTGGATGTAAAGCTGAGAGATTCATACTTGAAGATGGAAATGGTGGAATGAAGAAAAAGAAATGTTCAGGAGTCATTGCAGCAGCAACGTGGAGGAGTAAGGTAACAAAGAAACTCCTAATCGAATCCAAGGTAACTATTTCAGCATGTGGCAGTCTGTCCACTCCTCCTCTAATGATTTCCAGTGGACTGAAAAATCCACACATTGGAAGGAATCTCCATCTCCACCCAGTTCTATTTGCATGGGGATACTTCCCAGAAGACATGACAAACTTCAGTGGCAATAACTACGAGGGTGGGATCATAACTTCTATCCACAAGGTATTTGCAGAAGAGGCCACCCCAAGATTCATCATAGAAACACCTGCGGTAGGACCAGGATCATTTTCAGCATTGGCTCCCTGGCTTTCAGGGCATGACATGAAAGACAGGATGGAAAAGTATGCAAGAACTGCTAACATTTTTGCCTTGATTAGAGACCATGGTTCAGGAGAAGTGAAGGCTGAAGGGAGAATAACTTACAGACTTGACCAAGAGGACAAAGAAAACCTTAGAATTGGACTAAGGAAGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTTGGAACATTCAGGAGTGATGGGCAAAGACTGAAATGTAAGGGGATGAAGGAGGAAGATTTAGAGGAGTTTCTTGACACTGTGACAATAGTTGGGGGTCCAAGGTCCAGGAATGAACTCTGGACAGTGTTTACATCTGCACATCAGATGACAAGTTGTAGAATGGGTGCCACTGAAGAAGAAGGTGCAGTTGATGAAAATGGTGAGAGCTGGGAAGCAAAAGGCTTGTATGTGTGTGATGGGAGTGTTTTGCCAACTGCAGTTGGTGTCAATCCCATGGTAACCATTCAGTCTACGGCATACTGTATTGCCACCAAGATTGCAGAATCATTTACCAAAGCTAAACAAACCATAAATAGTTAA 2184 0.4483 MEGSVNCHPLLRGGRREKDYSHGLSSSQMHVMASICHTLFPLPLEETSHVPFPHEAAELLRKRVVPEALSLVNWVLWILSFRLGTLFLCGRLCLNWKWPFIHNFSEISLDKREEILRNWSREKRWVPLRIVFLLIKLAFFYTFFSRADENGHNPAWEAIGYQVDTKEKLIQKERPLQRGLIETIYETHNTLMQSLAEKGLEVTEDKLQNLYKVKCDVVIVGSGCGGGVAAAVLANSGQKVIVLEKGEYFVSHDYSSLEGPSMNELYESGGILPSLDGKMMILAGSTVGGGSAVNWSACIRTPDSVLREWSKKKKIPLFASSDYQSAMDTVCRRIGVTEKCNKPGFQNQILVQGCEKMGLKVESVATNSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILSGCKAERFILEDGNGGMKKKKCSGVIAAATWRSKVTKKLLIESKVTISACGSLSTPPLMISSGLKNPHIGRNLHLHPVLFAWGYFPEDMTNFSGNNYEGGIITSIHKVFAEEATPRFIIETPAVGPGSFSALAPWLSGHDMKDRMEKYARTANIFALIRDHGSGEVKAEGRITYRLDQEDKENLRIGLRKALRILVAAGAVEVGTFRSDGQRLKCKGMKEEDLEEFLDTVTIVGGPRSRNELWTVFTSAHQMTSCRMGATEEEGAVDENGESWEAKGLYVCDGSVLPTAVGVNPMVTIQSTAYCIATKIAESFTKAKQTINS 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02223 727 Pfam GMC oxidoreductase 216 483 IPR000172 GO:0016614|GO:0050660
Vian2g02223 727 PIRSF Lg_Ch_AO 44 724 IPR012400 GO:0046577
Vian2g02223 727 PIRSF Lg_Ch_AO 10 50 IPR012400 GO:0046577
Vian2g02223 727 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 20 723 - -
Vian2g02223 727 Gene3D - 200 512 IPR036188 -
Vian2g02223 727 SUPERFAMILY FAD/NAD(P)-binding domain 214 717 IPR036188 -
Vian2g02223 727 Gene3D - 567 718 IPR036188 -
Vian2g02223 727 Pfam GMC oxidoreductase 576 709 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02223 Vian-Chr2 42327970 42331401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02223 8 718 Acyl Lipid Metabolism Gene Families AT4G28570 58.776 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02223 K17756 - gmx:100808951 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02223 2 42327970 42331401 Vian2g02223 2 42327970 42331401 ECH