Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02222 ATGTGCATGGCGAGCCCAGGTTTATACCGCAGAGAGCTACCTTCCCCTGCAATCGAGTTTGCTTCGCCCCTAGGCAAGAAGCTGTTCGGCGAGGCACACGAGCAAGGAACCATGGAAGCCTTCTTCAAGTTAATATCCTACTATCAGACGCAATCAGAGCCTGCATACTGCGGTCTCGCCACACTTTCCGTTGTTCTCAATGCCCTTGCTATTGATCCTGGAAGAAAATGGAAAGGTCCTTGGAGATGGTTTGACGAGTCCATGCTGGATTGCTGTGAGCCTTTGGCTCAAATTAAACTGGAAGGCATTACGTTCGGGAAAGTTGCGTGTTTGGCTCGATGCAATGGAGCTAAGGTGGAAGCCTTTCGATCGGATAAAAGCTCGGTTGATGAGTTTCGCAAACGTGTGATTTCGTGCTCTCAGTCTGAGGATTCTCACGTCATTGTATCTTACCACAGGACACCTCTCAATCAGAGTTGTAGACATGAAGGTTGGAGCCGTGTCGCCAAATTTCTAACTGAAGATGTCCCTCAACTTCTTAAGTCAGAGGATCTAAAAGATGTTCAGGAAGTGCTGTCTGTTATTTTTAAACCGCCTCCTAGTGAATTGAGACGGTTAATAACATGGATTGCTGAAGTTCGCAGACAAGAAGATGGAAATCTCACATTGAGCGACGAGGAAAAAGGAAGGCTTGCTTTAAAGGCTGACATACTGGAACAGATTCGAACAACTGCACTCTTCAAACACGTGACCAGATGGTTGGATTCTGAAAATTCACGTTCTAAAACATATGCAAACCTTGGTGACGAAGATACGCTAGCAGTACTTGCCACCGGTGTTTGTTGCCAAGGGGCGGATCTTTTGACTGGTTGTGGTAGGTTAGGTTTGTCAGGTGGAAAAAGCTGCGGTCAAATAGAGGTAAAACTTCTGAATGTTGACAGTGAAAATCCAGGAACATTAGTTTCAGGAACTGTTACAACTAGTGGTGGTAGTGAAGAAGTCGAAGTGTTGGTTCCTCTGTGTCAAAGGGAGCCAAGTAGGTTATGTCTTTATAATGAAGGTCACTGCATAGAGATGCACCCGTCTGATGCAGATTTCTTAACGGTACTTTTATTGGCCTTGCCCTTGCATACGTGGTCGGGTTTTAAAGAAGAAAAGCTGCGAGTGGAAGTTTTGAGCCTTCTAGCAACTGAAGATCTCCCTCCCCTACTTCAGGAAGAGGTAATGTTCAGTTATTGA 1239 0.456 MCMASPGLYRRELPSPAIEFASPLGKKLFGEAHEQGTMEAFFKLISYYQTQSEPAYCGLATLSVVLNALAIDPGRKWKGPWRWFDESMLDCCEPLAQIKLEGITFGKVACLARCNGAKVEAFRSDKSSVDEFRKRVISCSQSEDSHVIVSYHRTPLNQSCRHEGWSRVAKFLTEDVPQLLKSEDLKDVQEVLSVIFKPPPSELRRLITWIAEVRRQEDGNLTLSDEEKGRLALKADILEQIRTTALFKHVTRWLDSENSRSKTYANLGDEDTLAVLATGVCCQGADLLTGCGRLGLSGGKSCGQIEVKLLNVDSENPGTLVSGTVTTSGGSEEVEVLVPLCQREPSRLCLYNEGHCIEMHPSDADFLTVLLLALPLHTWSGFKEEKLRVEVLSLLATEDLPPLLQEEVMFSY 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02222 412 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 3 238 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Vian2g02222 412 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 159 IPR040409 GO:0016756|GO:0046872|GO:0046938
Vian2g02222 412 Gene3D - 17 175 IPR038156 -
Vian2g02222 412 Pfam Phytochelatin synthase 9 159 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Vian2g02222 412 SUPERFAMILY Cysteine proteinases 13 159 IPR038765 -
Vian2g02222 412 Pfam Domain of unknown function (DUF1984) 160 410 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02222 Vian-Chr2 42311601 42314730 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02222 K05941 - fve:101304357 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02222 2 42311601 42314730 Vian2g02222 2 42311601 42314730 ECH