Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02221 ATGGCGACGGCGGGATTGTACCGACGCCTTCTTCCTTGTCCTCCCGCCGTCGAATTTGCTTCCTCACAAGGCAAGGAACTTTTTCTCGAAGCCATTCACAATGGAACCATGGAAGGCTTTTACAAGTTGGTTTCCCACTTTCAAACACAGTCCGAGCCCGCTTTCTGCGGTCTCGCTAGCTTGTCTATGGTTCTCAATGCTCTTGCCATTGATCCTGGAAGGAAGTGGAAAGGGCCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAATCTCTAGAAAAGGTGAAAGTTCAGGGCATCACGTTTGGGAAGCTTGTGTGTTTGGCTCAATGTGCTGGAGCCAAAGTTGATTCCTTTCGTGCTAGCCATAGCAGCATTGATGATTTTCGTAAATATGTCATCAAGTGTTCCATGTCTGATGAGTGTCACGTTATCTCCTCATACCATAGAGCTGCCCTTGAGCAAGTATGTATGAATTATGTCGACGAGGCTACTGGACGAACTAGAGGATTCTTGCTTGTATCAAGGCCTCATAGGGAACCTGGATTGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGATTAATATTGCAAAGTTCCTGATAGACGATGTTCCTCTTCTATTAAAATCAGAGGATGTCAAAGACGTTCATCAGGTTGTTTCAATTATAGTCTCATCACTGCCATCCAAGTCTGAACAGTTTATCAAGTGGGTGGCAGAGATCAGGAGGCGAGAGGATGGTGGTCCAAGTTTGAGCACAGAGGAGAAAGCAAGGCTTGCTATCAAGGAAGAGGTATTGAAACAGGTCCAGGAGACCGGCCTTTTCAAATATGTAGCTTCCTTTCTGTCAAATTCTTGCAGCAGGGAATCACCAGATGATACAGATGCGTTACCTGTCATTGCTGCAAGTATTTGTTGTCAAGGAGCAGAAATTTTAGCTGGGAAACCTTGGTCACAGGCAGGGTATAGCTGTCAAGTAACATGTATGAAATGCTTGAAAGCTGAAGATGACAAGCCAATAACAATGGTTTCTGGGACTGTGGTAAATGGTAACACTGAGCAAGGTGTTGATGTGTTGATTCCTTCTTCAAGTAGGAAATTATGTAGCAATTGCTCTAGGACAAGTAATTATATGAGGATGCATCCAGCTAGCACTGACGTGCTAACAGTGCTACTACTGTCCTTACCATCTACAACATGGACAGGCATCAAAGATGAGCAGCTTTTGACAGAAATACACAGTCTGGTTTCAACTGAAAACCTTCCCTCTTTGCTTCAAGAAGAGGTTCTGCATTTGAGACGTCAGCTTCAGCTTCTCAAGAGATGTCAAGAGGGTAAGGTTGATCAGGATCTTGGTGCTCCTCACTCTTAG 1380 0.4449 MATAGLYRRLLPCPPAVEFASSQGKELFLEAIHNGTMEGFYKLVSHFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCESLEKVKVQGITFGKLVCLAQCAGAKVDSFRASHSSIDDFRKYVIKCSMSDECHVISSYHRAALEQVCMNYVDEATGRTRGFLLVSRPHREPGLLYTLSCKHESWINIAKFLIDDVPLLLKSEDVKDVHQVVSIIVSSLPSKSEQFIKWVAEIRRREDGGPSLSTEEKARLAIKEEVLKQVQETGLFKYVASFLSNSCSRESPDDTDALPVIAASICCQGAEILAGKPWSQAGYSCQVTCMKCLKAEDDKPITMVSGTVVNGNTEQGVDVLIPSSSRKLCSNCSRTSNYMRMHPASTDVLTVLLLSLPSTTWTGIKDEQLLTEIHSLVSTENLPSLLQEEVLHLRRQLQLLKRCQEGKVDQDLGAPHS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02221 459 Pfam Domain of unknown function (DUF1984) 191 439 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Vian2g02221 459 Gene3D - 16 159 IPR038156 -
Vian2g02221 459 Pfam Phytochelatin synthase 7 157 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Vian2g02221 459 SUPERFAMILY Cysteine proteinases 14 177 IPR038765 -
Vian2g02221 459 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 4 158 IPR040409 GO:0016756|GO:0046872|GO:0046938
Vian2g02221 459 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 233 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02221 Vian-Chr2 42305947 42309068 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02221 K05941 - gmx:100808418 735.717