Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02219 ATGAACATCTTCTCCAAGAAACCCACTGCCAAAGAGGCCCTTCGTGAGAGTAAACGAGAAATGGCGAACGCCACTAGAGGTGTGGAGAAGGAAATTGGAGCACTACAATTGGAAGAAAAGAAGCTTCTTGCTGAGATAAAAAGAACTGCTAAGACAGGCAATGAGGCAGCTACTAAAATTCTAGCACGCCAGTTGGTCAGGCTTAGGCAACAAATTGCCAATCTTCAAGGTAGTAGAGCTCAGATGAGAGGCATAGCAACTCACACGCAGGCGATGCATGCCCATTCTTCTGTTGCTGCTGGCATGAAAGGCGCTACAAAGGCAATGTCAGCTATCAATAAGCAAATGGAGCCAGCTAAGCAAGCTAAAATTATACAGGACTTCCAGAAACAGTCAGCACAGATGGATATGACTACTGAAATGATGTCCGATGCCATAGATGATGCCTTGGATGATGATGAAGCTGAAGAGGAAACTGATGAACTGACAAATCAGGTGCTGGATGAAATTGGTGTGGATGTTGCCTCACAGTTATCAGCAGCCCCCAAAGGGAGAATTAGAACAAAGAATACTGAAGATGTTAGCAGCTCGGGCATTGACGAACTTGAGAAGCGTTTGGCAGCTCTAAGAAACCCTTAA 639 0.4523 MNIFSKKPTAKEALRESKREMANATRGVEKEIGALQLEEKKLLAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAAGMKGATKAMSAINKQMEPAKQAKIIQDFQKQSAQMDMTTEMMSDAIDDALDDDEAEEETDELTNQVLDEIGVDVASQLSAAPKGRIRTKNTEDVSSSGIDELEKRLAALRNP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02219 212 Gene3D - 4 181 - -
Vian2g02219 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 211 IPR005024 GO:0007034
Vian2g02219 212 MobiDBLite consensus disorder prediction 178 199 - -
Vian2g02219 212 MobiDBLite consensus disorder prediction 1 22 - -
Vian2g02219 212 Pfam Snf7 16 185 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02219 Vian-Chr2 42292565 42295578 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02219 K12192 - gmx:100306343 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02219 2 42292565 42295578 Vian2g02219 2 42292565 42295578 ECH