Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02214 ATGGCAAGCATGGCAAGAGGAAGAGCAGATGTGAACTCTAGAAAAAATTTAGTCGTGGCTGTGTTGTTTTTGGTGATTGTTGGTGTTTTCTTCTACTTTTATTCTCAGAGTGGCGATTCATCTATTGTTGAGTATGGGGATAAATCTTTGAGACAATTGGGTTTGAAAGGAGACAGAGATGTGAGCGAATCTTCCTCCACACTTATTGGAGGAGAGGACAGTGCTATACCAAAGACCATTCCAGTCTGTGACGATCGTCTATCAGAGCTTATTCCTTGTCTGGACAGAAACCTCATATACCAAACAAGATTGAAGCTTGATTTAGCACTGATGGAGCACTATGAAAGACACTGCCCAATACCTGAGAGGCGTTATAACTGTTTGATTCCTCCTCCTCCAGGGTACAAGATTCCAATCAACTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAACATACCTCATACCCATCTTGCAACTGAAAAATCTGACCAGAATTGGATGGTTGTGAAAGGTGAAAAAATAGTTTTTCCTGGTGGAGGAACCCATTTCCATTATGGTGCTGATAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCAAACAATAATATAAACAATGAGGGAAGAGTGAGGTCTGTTCTTGATGTTGGGTGTGGAGTTGCTAGCTTTGGAGGATATCTTCTTTCTTCTGATGTGATAGCAATGTCATTGGCTCCAAATGATGTTCATCAGAATCAAATTCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTAGGGACCCTGAGGCTCCCTTACCCAAGTAGATCTTTTGAATTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAGAGAGATGGTATCCTTCTCCTTGAGCTGGATAGGTTACTGAGGCCAGGAGGTTATTTTGCATATTCATCTCCTGAAGCCTATGCACAGGATGAGGAAGATAGGAGAATATGGAGAGAAATGAGTGCTCTTGTGGAGAGGATGTGCTGGAAAGTTGCTGCTAAGAGGAATCAGACTGTTATTTGGGTCAAGCCTCTCACAAATAGTTGCTACTTAAAGAGAATGCCTGGTACTTTGCCTCCACTATGCAGATCTGATGATGATCCTGATGCTGTTTCCGGAGTTAAAATGAAAGCTTGCATTTCACGCTATTCTGATCAAATGCACAAAGCAAAAGGAAGTGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTTCTAAAATGTTTGAGAAGGACGTGGAAGTTTGGCAAGAAAGAGTTGATAATTACTGGAGCAAGCTAGGAAGTAAGATTAAAGCAGGCACAATACGGAATGTGATGGATATGAGGGCAAATATAGGTTCATTTGCAGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCACAAAATGAACCAAAATCTCTCGCCATAATATATGACAGAGGATTGATAGGAGCAGTTCACAACTGGTGTGAAGCTTTTTCAACCTACCCTCGAACTTATGACCTACTACATGCATGGACTGTATTTTCTGATATTATTAAGAAAGAATGCAGTCCAGAGGACTTGCTGATTGAGATGGATAGAATTCTGAGGCCAAAGGGCTTCATCATTGTCTATGATAAGCGGTCAGTGGTGGAGTATGTAAGGAAATACTTGCCTGCATTACACTGGGAAGTTGTGACAAATTATGACATTGATCAAGGTAAAGATGATGAAGATGAAGAAGATGATCATGCAGTGGTTATAATTCAAAAGATGTGGCTCACAAGTGATAGTATCCAGGTTTCAGAATAG 1848 0.414 MASMARGRADVNSRKNLVVAVLFLVIVGVFFYFYSQSGDSSIVEYGDKSLRQLGLKGDRDVSESSSTLIGGEDSAIPKTIPVCDDRLSELIPCLDRNLIYQTRLKLDLALMEHYERHCPIPERRYNCLIPPPPGYKIPINWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNNINNEGRVRSVLDVGCGVASFGGYLLSSDVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFEFAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSALVERMCWKVAAKRNQTVIWVKPLTNSCYLKRMPGTLPPLCRSDDDPDAVSGVKMKACISRYSDQMHKAKGSGLAPWPARLTTPPPRLAEIHYSSKMFEKDVEVWQERVDNYWSKLGSKIKAGTIRNVMDMRANIGSFAAALKDKDVWVMNVVPQNEPKSLAIIYDRGLIGAVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSPEDLLIEMDRILRPKGFIIVYDKRSVVEYVRKYLPALHWEVVTNYDIDQGKDDEDEEDDHAVVIIQKMWLTSDSIQVSE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02214 615 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 426 574 IPR029063 -
Vian2g02214 615 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 89 587 IPR004159 GO:0008168
Vian2g02214 615 FunFam Probable methyltransferase PMT19 422 585 - -
Vian2g02214 615 Gene3D Vaccinia Virus protein VP39 206 351 IPR029063 -
Vian2g02214 615 FunFam probable methyltransferase PMT3 187 354 - -
Vian2g02214 615 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 25 582 IPR004159 GO:0008168
Vian2g02214 615 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 349 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02214 Vian-Chr2 42246777 42251442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02214 - - gmx:100805403 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02214 2 42246777 42251442 Vian2g02214 2 42246777 42251442 ECH
Vian2g02214 2 42246777 42251442 Vian3g02696 3 41747460 41752102 PCT