Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02199 ATGTCTTTCAGAGGCCTAAGCAGGGCTATTGACCCAGATGCTTTTAAATTCCAGCCAAATGCTTCATCAGGCATGGGTGTTGCTGATCACAGCAAAACCACCTTCATGGAACTGAAGCAGAAGAAGGTCCATCGCTATGTGATCTTTAAGGTTGATGAGAAGAAAAGGGAGGTTGTGGTTGAGAAGACCGGTGGCCCCGCTGAGAGCTATGATGATTTCGCTGCATCTTTGCCTGAGAATGATTGCAGATATGCTGTCTTTGACTTCGATTTCGTCACTTCTGAGAATTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCCCCTTCAACTTCTCGGATTCGTGCCAAGATGCTCTACGCCACAACTAAAGACAGGTTAAGACGTGAGCTAGATGGTGTTCATTATGAAATCCAGGCTACTGACCCCACTGAAATGGATCTTGAAGTGCTGAGAGAGCGTGCACATTGA 471 0.4565 MSFRGLSRAIDPDAFKFQPNASSGMGVADHSKTTFMELKQKKVHRYVIFKVDEKKREVVVEKTGGPAESYDDFAASLPENDCRYAVFDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATTKDRLRRELDGVHYEIQATDPTEMDLEVLRERAH 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02199 156 ProSiteProfiles ADF-H domain profile. 24 156 IPR002108 GO:0003779
Vian2g02199 156 SUPERFAMILY Actin depolymerizing proteins 17 156 - -
Vian2g02199 156 Pfam Cofilin/tropomyosin-type actin-binding protein 32 154 IPR002108 GO:0003779
Vian2g02199 156 PANTHER COFILIN-RELATED 20 155 IPR017904 GO:0015629|GO:0030042
Vian2g02199 156 Gene3D Severin 15 156 IPR029006 -
Vian2g02199 156 SMART adf_2 29 156 IPR002108 GO:0003779
Vian2g02199 156 FunFam Actin-depolymerizing factor 2 18 156 - -
Vian2g02199 156 CDD ADF_cofilin_like 23 155 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02199 Vian-Chr2 42020874 42023151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02199 K05765 - gmx:100819975 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02199 2 42020874 42023151 Vian2g02199 2 42020874 42023151 ECH