Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02192 ATGTTTAGCAGGCCAAGGGGTGCCAGTGCATTTAGTATATTCAAATGGAAACAACCAGGTGCATCATCTCTGACAGCAGGTTTACTTCAGGAAGATCAGCTAGAGATTGAATTGTCTGATTATGGAAAGATTCCTAGTCCAGGCAGCGAGAGCCCTTCAGGGCTTCTTAATGGTGACAGCCTAAATGTAGAACCAATTTCCGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTATGGTGCATCATTATAAAATGGATTGTTGAGCTTCTAAGTCTAGGGTTCACCATATGTTTTTCAGGATTTTTTTTATTATATGTTGACTGGAATGGACTCCGTAATGCAAAGTGTGGGATGGATGCGGTTGAATCTGGGATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCGTCAACACCCCTTAACCCCACTAACAATTACCAAAGCTATTATTGTTGGATACTTGGGATTATTTTCTATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACTCTTGAAATCCGGCGTTTTTACTACAATAGTCTCTATGTCACTGACAATCAAATTCAAACCATGCCATGGGCTACAATTCTTGAAAAAGTTGTTCTGCTACAAAGGTCTCAGCAACTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATTGTCATGCGGTTGATGCGGAAGGAAAACTACTTAATTGGAATGCTCAACAAGGGTGTGCTAGCTTTCCCTATTTCACAGTGGTTTCCAGGTGCTGGTCCTATAGTGACATCTGGTTCTAGTGGAACACCAAATCGTTTAATACTAACCAAGACCCTAGAGTGGACTTTGAATTGGTGCATCCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAAGACATTACAAAGAAGGCTCATGGTTGTTGGGCTTGCAATGCTTTTACTCTCTCCATTTCTTGTCATATTCATGCTGGTGTATCTCTTTCTGAGACATGCTGAACAATTTTATAATCACCCTAGCACTGCATCATCTCGAAGATGGTCAAATCTGTCTAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATAGCAGTGTATTGCACGCATCTGATTATCTCAAGCAATTTCCTGCACCAATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGCGGCTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTACTAGAGGGCCATATATTTGGTCGGAACTTGCTTTGGTATGCGGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCAATCAACAATGAGCTTCTGGTTTTAGATGCTGAAGGAGCTATGTCTATGGTGGTTCAACATACTCATTATCTGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAATCGGTCCGTGCTGAGTTTGCAACTCTATTCCAGTATACTGGAATGATGCTACTTGAAGAGATGGCCTCAATTTTCCTCACACCATACTTGCTTCTGTTTATTGTCCCAAAGCGGGTTGATGATATCTTGCAATTCATTGCTGATTTCACTGTAAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAACATGGAAACAGTCATTATGGTTCCCCTTGCAATGCACCTCGTAGCCGGAGGAGTTCTCAAGGGAAGATGGAGAAATCATTGCTGAGTTTTCAGAGTAGTTATCCATCATGGGAACCAAGCGCACAGGGTAAACAGTTTTTGATAAATCTTAGAAAATTCAGAGAGGAAAAGTTACCAGTACAACGAAACATACATGCAGCTTCCCCTCCTAGAATGTGGAGGGGCATTTCCAACACGGGAAGCAATATTGGAGACAGAAACAGGTTTATGTCCAGGGAAATGCCATACAGTACTTTTTTAACTGGCAATCACTTGGGTTCTCTGTGGTTGATTGAAGCCAATCAACACAATCATCCCTATCTCCTTGATTGGTACTATACATCTCGATCTTCTGACGTAAATCAAGGAGACGATCCTTCAGAAGCGTTTGGAGTAATAGAACATCATTCTAGAGAGCATTGGATTCCCTCCGATATGACACACAATGAAAGTGGATATGAGGAATACTCAAATGAGAATCGTCGAGGTTGGGCTCAATCTCATCTTGTGACTTCCACATCCGTACCCATTTTCAGGGAAAGCTTTATTCAGGATCAAAGTTATAATGGACTGACCCATACTACCAGGAGTCATTGGTGGGCTAGACACGCGCAGCAGGGTGGACAGAATCAGACAAGCTTTTTTGAGCCTCCAGATTTCAATCAGGAAAGATATAATTATTATGATAAGTTTTCTGATAGAGGGTCAGAGGAAGAAGATCGTGAACAACGCTTGTACTCTAGAGATAGTCACAGATTATCTAGAACATACACAGATGACTTGGGGGCTGGGGAATTAAATCTTCATTTTGATGATATTTATAGCAGACCTCCAGAAACCCCACCTGCAAGCTTTTGA 2577 0.4144 MFSRPRGASAFSIFKWKQPGASSLTAGLLQEDQLEIELSDYGKIPSPGSESPSGLLNGDSLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALRQHPLTPLTITKAIIVGYLGLFSIYWIFCFLRFFAQLKDTLEIRRFYYNSLYVTDNQIQTMPWATILEKVVLLQRSQQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPIVTSGSSGTPNRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLQRRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSVLHASDYLKQFPAPIISIIAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAINNELLVLDAEGAMSMVVQHTHYLPKRWRGKESTESVRAEFATLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILQFIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSFQSSYPSWEPSAQGKQFLINLRKFREEKLPVQRNIHAASPPRMWRGISNTGSNIGDRNRFMSREMPYSTFLTGNHLGSLWLIEANQHNHPYLLDWYYTSRSSDVNQGDDPSEAFGVIEHHSREHWIPSDMTHNESGYEEYSNENRRGWAQSHLVTSTSVPIFRESFIQDQSYNGLTHTTRSHWWARHAQQGGQNQTSFFEPPDFNQERYNYYDKFSDRGSEEEDREQRLYSRDSHRLSRTYTDDLGAGELNLHFDDIYSRPPETPPASF 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02192 858 PANTHER APG9 AUTOPHAGY 9 2 811 IPR007241 GO:0006914
Vian2g02192 858 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02192 Vian-Chr2 41913361 41918535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02192 K17907 - gmx:100777405 1509.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02192 2 41913361 41918535 Vian2g02192 2 41913361 41918535 ECH