Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02183 ATGAATTCCGTCTGTGATGACGGCGCCACCGTAATCCCTGGTCTCCCAAACGACGTCGCGGCGTGGATCCTCTCCAAGGTGCCATACTCGCACCACGCGAGACTGAAAAGCACTTGCAAATCATGGAAACTGCTTTTGTCTTCGAGATCGTTCCTGAACTCTTTGAATAAGAGGAACCATCTTCTCTGCATCTTCCCGCAGGACCCATCGATCGCGTCGCCGTTCCTCTTCGACCCAAACGCGCTCGCCTGGTGCCCTCTCCCTCCCATGCCCTGCAACCCCCACGTGTACGGCCTATGCAACTTCGCCGCGGTGCCTCTCGGGCCCCACCTTTACGTCCTCGGGGGCTCCCTCTTCGACACGCGCTCCTTCCCAATCGATCGCCCCTCGCCCTCCTCGGCCACCTTCCGCTTCAACTTCCACGACTTCTCCTGGGAGCCACGCGCCCCCATGCTCACGCCGCGGGGCAGTTTCGCCTGCGCCGTCGTCCAGGGGCGTATTCTTGTCGCCGGCGGGGGGTCGCGGCACACGATGTTTGGGGCTGCTGGGACTAGGATTCGGTCGGTTGAGCGGTACGAGGTGGGGAGGGACCGGTGGGTGGCGATGGATCCGCTGCCCGGGTTTCGGGCTGGGTGTGTGGGGTTTGTTGGCGGGGAGGGGAGGGAGTTCTGGGTGGTGGGAGGGTACGGCGCGTCGCGGACCATATCCGGGGTTTTTCCGGTGGATGAGTATTACAGGGATGCAGTGGTGATGGAAGTTGAGGGTGGGGGGTGGCGGGAGGTTGGGGATGTGTGGGGGGATGGGGAGAGAGTGAGGGTTGGGAAGATTGTGGTGGTGGATGCTGATGGATGTCCCACCCTTTTCATGCTTGATGGGAACGAGATTTTGAGGTACTTTTCAGCTTGTACTCATGAATTACATTTGAATTCTGTGGTTTTGATTGTTTTTGGTTTCGTGTTTCATTGA 966 0.5942 MNSVCDDGATVIPGLPNDVAAWILSKVPYSHHARLKSTCKSWKLLLSSRSFLNSLNKRNHLLCIFPQDPSIASPFLFDPNALAWCPLPPMPCNPHVYGLCNFAAVPLGPHLYVLGGSLFDTRSFPIDRPSPSSATFRFNFHDFSWEPRAPMLTPRGSFACAVVQGRILVAGGGSRHTMFGAAGTRIRSVERYEVGRDRWVAMDPLPGFRAGCVGFVGGEGREFWVVGGYGASRTISGVFPVDEYYRDAVVMEVEGGGWREVGDVWGDGERVRVGKIVVVDADGCPTLFMLDGNEILRYFSACTHELHLNSVVLIVFGFVFH 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02183 321 SUPERFAMILY Kelch motif 66 283 IPR015915 GO:0005515
Vian2g02183 321 SMART kelc_smart 110 165 IPR006652 GO:0005515
Vian2g02183 321 SMART kelc_smart 166 218 IPR006652 GO:0005515
Vian2g02183 321 Pfam Kelch motif 154 206 IPR006652 GO:0005515
Vian2g02183 321 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 8 302 - -
Vian2g02183 321 SUPERFAMILY F-box domain 10 68 IPR036047 GO:0005515
Vian2g02183 321 CDD F-box_AtAFR-like 12 51 - -
Vian2g02183 321 Gene3D - 56 318 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02183 Vian-Chr2 41762862 41763827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02183 - - gmx:100820159 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02183 2 41762862 41763827 Vian2g02183 2 41762862 41763827 ECH