Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02166 ATGAAGTTATCACGTTGGTGGCAGAGGACTCTGATCCTCGCTCTTCTCTCTGTCTCCGTCGTTGCTCCGGTTTTCTTGGTCTATCACCGCCTCAATCTCACTCCCTACGCAAGACGAGAGTTTCAAGAAGATATATCCAGTGTTACATTTAGGACAGATCCTTTACAGCTAAATGCTATTGGGCAGGAAGGTGTTGAAGAATTGGAAGAGCCAAAAGAAGTTGTTTATAAAGAAAAAGATTTTGGTTCAACAAATAGTTCCATACAACAAAAGAATAATGATTGTGAGAAATCTAAAATCCAAGGGTGTAGAAATAACATTTTGGAAAGAAATGTTTCAGAATTTAACCAGGACACTAGGCAAGAACTGAAAGCTCAGCAGAAAGAATTATTCTCCATCGTTGGGAATGAGAACACATTTAATACAACAGTCACGCATAATCAGAGCATGCACACTCATTCTCGAAAAACGACAGATGCTAATGTTGAAATGAAAGATAAGAAATCTACGCCAAGAACAACCCAAAATCATCAGAGTTCACGACCTCAGCCTAGGAGAGTGTTAAATCAGAAGGTTTTAGAAATTAAGGATCAAATTATTAGAGCCCGAGCATACTTGGGTTTTGCTTCACCAGGCAGCAGCTCACGCTTGATGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAACGTGCACTTGGAACAGCTACTAAGGATTCCGACCTGTCTAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGCAGACCGTGCTTTCCCGGACTGCACTGCTATGGCAACTAAGCTCCGGGCAATGAATCATAAGACTGAAGGGGAAATTCATTATCAGCAACGGGAAACAACATATCTTGTTCATCTTGCTGCAAGGACTACCCCGAGAGGTCTTCACTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCCTGAGACCTGAGGACCGGAAGCTTCCAAATGAAAATAAGATTAATGATCCAAAACTTCATCACTATGTTGTCTTCTCTGACAATGTTCTGGCGTGTGCAGTTGTTGTTAACTCTACTATCTCTAATGCCAAGAAACAGGGGAAACTTGTTTTCCATGTAGTGACCAATTCACTAAACTTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGAAAAGCCACAGTCCACATACAAAGCATAGAGAACTTTGAATGGTTGCTCAAGTACAATGCATTCAAAGAACAAAATTCCAGTGATCCAAGATTTACTTCTGAGTTGAACTACCTGCGTTTCTACCTTCCAGATATCTTCCCTACTTTAAATAAGGTTGTGCTCTTTGATCATGATGTCGTGGTGCAACAAGATCTCAGTAGGCTATGGAATGTTAATATGAAAGGGAAAGTAAATGCAGCAGTAGGCACTTGTCAGGAAGGGGAAACTTCATTTCATAGGATGGATACGTTCATAAACTTCTCAGATCCATTAATTGCAAATAGGTTTGATGTCAATGCTTGCACTTGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGAAGACAAAATTTAACTGCTCTCTATCACAGTTATTTGCAAATGGGTTCCAAGAGGCCATTGTTGAAAACTGGAAGTCTGCCTTTAGGGTGGCTGACCTTCTATAACAAGACTATGATTTTGGACAAACGGTGGCAGATTCTTGGTCTTGGTTATGACTCAGATGTTGATAAAAACCAGATTGACCGGGCTGCGGTTATACACTTCGATGGAATTAGGAAACCGTGGTTAGACATTGCAATGGGAAGATATAAAAGTTACTGGACCAAATTTGTGGAGTTTGACCACCCTATCTTGCAACGTTGCAATCTCCAGGCGTAG 1881 0.4104 MKLSRWWQRTLILALLSVSVVAPVFLVYHRLNLTPYARREFQEDISSVTFRTDPLQLNAIGQEGVEELEEPKEVVYKEKDFGSTNSSIQQKNNDCEKSKIQGCRNNILERNVSEFNQDTRQELKAQQKELFSIVGNENTFNTTVTHNQSMHTHSRKTTDANVEMKDKKSTPRTTQNHQSSRPQPRRVLNQKVLEIKDQIIRARAYLGFASPGSSSRLMKELKLRIKEMERALGTATKDSDLSRSALQKMRHMEASLSKADRAFPDCTAMATKLRAMNHKTEGEIHYQQRETTYLVHLAARTTPRGLHCLSMQLTADYFALRPEDRKLPNENKINDPKLHHYVVFSDNVLACAVVVNSTISNAKKQGKLVFHVVTNSLNFPAIWMWFLLNPPGKATVHIQSIENFEWLLKYNAFKEQNSSDPRFTSELNYLRFYLPDIFPTLNKVVLFDHDVVVQQDLSRLWNVNMKGKVNAAVGTCQEGETSFHRMDTFINFSDPLIANRFDVNACTWAFGMNLFDLQQWRRQNLTALYHSYLQMGSKRPLLKTGSLPLGWLTFYNKTMILDKRWQILGLGYDSDVDKNQIDRAAVIHFDGIRKPWLDIAMGRYKSYWTKFVEFDHPILQRCNLQA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02166 626 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 145 624 IPR029993 GO:0047262
Vian2g02166 626 MobiDBLite consensus disorder prediction 152 172 - -
Vian2g02166 626 Coils Coil 218 238 - -
Vian2g02166 626 SUPERFAMILY Nucleotide-diphospho-sugar transferases 340 623 IPR029044 -
Vian2g02166 626 Pfam Glycosyl transferase family 8 308 600 IPR002495 GO:0016757
Vian2g02166 626 MobiDBLite consensus disorder prediction 144 188 - -
Vian2g02166 626 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 333 615 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02166 Vian-Chr2 41565268 41570363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02166 1 626 Glycosyltransferase AT1G06780 48.910 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02166 K13648 - gmx:100811619 965.681