Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02165 ATGGCATCCATCATCGCCGGCACCCCTACAACATCGATCTCTCGCACAGGTCTTGTACTCAAGCGACCTTTTGGGGTCTCATCCTCCACCGTTCTTGGATTGCCAGCAATGGGTAGTAGGGCAGGGAAAGTGAGATGCTCGATGGAGGAAAAACCATCTTTGCAGGAAAGCAGTTCAAAGGTGGGAATGGGAACATCCTTGCTAGCAGCTGCATTCGCCGCAACCATGTCAAGCCCAGCCATGGCATTGGTGGATGAGAGACTTAGCACTGAAGGGACAGGGCTTCCCTTTGGGCTTAGCAACAACCTTCTTGGTTGGATCCTGTTGGGTGTCTTTGCTCTTATATGGGCTCTCTTCTTTGTCTACACTTCCACTCTTGAAGAGGATGAAGAGTCTGGAATGTCCCTCTAA 411 0.5085 MASIIAGTPTTSISRTGLVLKRPFGVSSSTVLGLPAMGSRAGKVRCSMEEKPSLQESSSKVGMGTSLLAAAFAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILLGVFALIWALFFVYTSTLEEDEESGMSL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02165 136 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 136 IPR009806 GO:0009507|GO:0009523|GO:0015979
Vian2g02165 136 Pfam Photosystem II reaction centre W protein (PsbW) 1 136 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02165 Vian-Chr2 41563548 41564211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02165 K02721 - gmx:100306223 208.764