Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02164 ATGGCTTCATCAATGGCAACCATGGTCGTCCCTTTCCCCCAAACACTGAAGAGCCAAGCCCGCAGCTTTCTATCCCAACCACCAAACACCGTAAAGAAACTCAAACCCAAACACACAAAAGCTTTAAAAACTTACCCAACAAACGTAACATGCAGTGCCACGCTTTCATCTTCTCTGGAGACCATTGAGAAGCAAGAGGAAGGGAAGAAACAAAAGGAAGTGGCGGAGGTGTGGCGCAAGATCCACGGGGAGAACAACTGGGCCGGCCTTCTAGATCCCTTGGACCCGTTAATGCGGACCGAGCTGATCCGCTACGGGGAGATGGCCCAGGCCTGCTACGACGCCTTCGACTACGACCCCTACTCCAAATACTGCGGCAGCTGCAGGTTCTCCATACCCGAGTTCTTCCAAAGCCTCGACATGCCCAACGTGGGATACAACGTCACACGTTATCTCTACGCCACGGCCAACATCAACCTCCCAAAATTCTTCCGCAAATCGCGGTGGCCCGACAAGAAGTGGAGCCAGCACGCGAACTGGTCGGGCTTCATCGCGGTGTCGGACGACGCGACGAGCAAACGTCTGGGGCGGAGGGACATCACGATCGCGTGGCGAGGGACGGTGACGAACGTGGAGTGGGTGGCTGACCTGACGAATTTCCTGAGACCGATCGCTCCCCTCATCCCGAGTCCCGACGAGGGTATAAAGGTGGAAGCCGGTTTCTTGGATCTGTACACGGACAAGGAACAGGAGTGTGGGTATTGTAAGTACTCGGCGAGGGAACAGGTTCTGGGGGAGGTGAAACGGTTGATGAAGATTTATGCGGATGAAGAGGTGAGTATTACGATAACGGGGCATAGTCTGGGGAGTGCGATGGCGATACTGAGTGGTTTTGATGTTGTGGAAAGTGGGGCGAGTGTGGGAAAGAGTGGGAGAAAAGCGCATGTATCGGTGTTTTCGTTTTCGGGGCCGAGGGTGGGGAATGCGAAGTTCAAGGAGAGGTTGGAAGGGGAGCTGGGGATAAAGGTGTTGAGAGTGCATAACAGGCACGACCTTGTGCCGCAGTCGCCGGGGTTTCTGTTCAACGAAGGGTTGGCACCGTGGCTGGTGAAGCTGGTGGATTGGTTGCCATGGTGTTATTTGCACGTTGGGCAGGAGTTGGAATTGGATCATAAGCAATCACCTTTCTTGAACCCCAATGGGGATGCTGCCTGCGCCCATAACTTGGAGGCTCACTTGCACTTGCTGGATGGATACCATAGGAAGTATGATCCATTTAAGAGAACGAGTGAGAGGGACATTGCTTTGGTGAACAAGTCATGTGACTTTTTGAAGGACGAGTATACGGTGCCACCAAACTGGAGGCAAGACCTGAACAAGAACATGATGAAGACTGAAGGTGGACGGTGGATGTTCACTGATCGCCAAGTGTCTCAAGATCCACACCACCAAGATATTGATCCCCATCTCGAGGAACTCGGTCTCTTCTCTTCTGATAAATCAACCAATAAGTAA 1515 0.5287 MASSMATMVVPFPQTLKSQARSFLSQPPNTVKKLKPKHTKALKTYPTNVTCSATLSSSLETIEKQEEGKKQKEVAEVWRKIHGENNWAGLLDPLDPLMRTELIRYGEMAQACYDAFDYDPYSKYCGSCRFSIPEFFQSLDMPNVGYNVTRYLYATANINLPKFFRKSRWPDKKWSQHANWSGFIAVSDDATSKRLGRRDITIAWRGTVTNVEWVADLTNFLRPIAPLIPSPDEGIKVEAGFLDLYTDKEQECGYCKYSAREQVLGEVKRLMKIYADEEVSITITGHSLGSAMAILSGFDVVESGASVGKSGRKAHVSVFSFSGPRVGNAKFKERLEGELGIKVLRVHNRHDLVPQSPGFLFNEGLAPWLVKLVDWLPWCYLHVGQELELDHKQSPFLNPNGDAACAHNLEAHLHLLDGYHRKYDPFKRTSERDIALVNKSCDFLKDEYTVPPNWRQDLNKNMMKTEGGRWMFTDRQVSQDPHHQDIDPHLEELGLFSSDKSTNK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02164 504 Gene3D alpha/beta hydrolase 77 485 IPR029058 -
Vian2g02164 504 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 31 476 - -
Vian2g02164 504 FunFam Phospholipase A1-II 3 77 482 - -
Vian2g02164 504 CDD Lipase_3 134 391 - -
Vian2g02164 504 Pfam Lipase (class 3) 202 359 IPR002921 GO:0006629
Vian2g02164 504 SUPERFAMILY alpha/beta-Hydrolases 101 417 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02164 Vian-Chr2 41556533 41559827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02164 64 495 Acyl Lipid Metabolism Gene Families AT2G30550 56.751 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02164 - - gmx:100815007 763.451