Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02144 ATGAAGTCCATGAAGCTGAATGGCAACGGTGCAGTTTTAATTGGGCCTCGAGAACAACATAAGGAGTTCCTAAACGAAAGTTTATATGACAAGGAATGCGTATCTGAACAAGTTCTACACGATGGTGACACTGTTTCTGGGAATTTCGTAGTCATTGACTACGATATTTTTTGGAGCTCAGACCATCCAGGAATCGATTTCAGTGTTACATCTTCGACAGGGAGTTTGGTGTACTCTATGAAGGGAACATCAGGAGACAAATTTCAATTCAAAGCCGCAATACATGGAATATATAAGTTTTGCTTTCAAAACCCTGCTTCAACACCAGAAACAGTGTCTTTCTACATTCACGTCGGTCACATCCCAAATGAACACGACTTAGCCAAAGATGAACATTTGGATCCCATTAATGTGAAGATTGCTGAGTTGCGAGAAGCACTGGAGTCTATTATAATAGAGCAGAAGTACTTGAAAGCACGTGATACTAGACATCGACACACAAATGAAAGCACCAGAAAACGTGTGGTTTTCTACACAATCTTGGAGTATATTTTGTTCGCTGCAACCAGCTTATTACAAGTGATATACATTCGACGTCTCTTCAGCAAATCATTTGCTTACAACCGAGTATAG 633 0.4013 MKSMKLNGNGAVLIGPREQHKEFLNESLYDKECVSEQVLHDGDTVSGNFVVIDYDIFWSSDHPGIDFSVTSSTGSLVYSMKGTSGDKFQFKAAIHGIYKFCFQNPASTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESIIIEQKYLKARDTRHRHTNESTRKRVVFYTILEYILFAATSLLQVIYIRRLFSKSFAYNRV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02144 210 Pfam emp24/gp25L/p24 family/GOLD 30 201 IPR009038 -
Vian2g02144 210 SMART EMP24_GP25L_2 11 202 IPR009038 -
Vian2g02144 210 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 36 127 IPR036598 -
Vian2g02144 210 ProSiteProfiles GOLD domain profile. 31 118 IPR009038 -
Vian2g02144 210 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 30 203 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02144 Vian-Chr2 41357255 41363285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02144 K20347 - gmx:100789501 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02144 2 41357255 41363285 Vian2g02144 2 41357255 41363285 ECH