Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02132 ATGTCGTCGTTACTAGTAGATTTGCTCCGCCAAAGTGGCGGCACCGCCGTCATCGACGGCGGTCTTGCGACGGAGCTGGAGCGCCATGGTGCGGACCTCAACGATCCCTTATGGAGTGCCAAATGCCTCTTTTCCTCTCCTCACCTCATTCGTCAGGTGCACCTTGATTATCTGGAAAATGGCGCTGACATTATAATCACAGCGTCTTATCAAGCCACCATTCAAGGTTTTAAAGACAAAGGCTATACTGATGAAGAGAGTGAAGCCATGCTCAGAAGGAGTGTTGAAATTGCTCGCGAGGCGCGTGAATTGTACTATAAAGGATGTTCTGAATGCTGTTCCGGTGATGGGGCTGAGGGTAAAATCCTCAAACAACGGCCTATCCTGATTGCTGCGTCAGTGGGGAGCTATGGAGCTTATTTAGCCGACGGATCAGAGTATAGGTTTGTTAACATTTTAGAAAGTGGTGATTATGGTGATGCTATCACGAAGACAAATCTGAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCAGGTGCTGACCTGCTTGCATTTGAAACAGTGCCCAATAAGCTTGAAGCTGAGTTTGAATTGCAGTCTGAAGACATACATGGTCTTTCAAAGTATATTTGTGGATTCAGCAAAGAGCAAAAGGCTGTTCTTGTCAAAATAGCTTATGCTGAGCTTCTGGAAGAAGAGGACATCAAAATTCCAGCATGGTTTGCTTTTAACTCTAAGGATGGAGTTAATGTTGTTAGCGGTGATTCTCTATTGGAATGTGGCTCTATTGCTGAATCATGCAATAAAGTTGTTGCTGTTGGAATTAACTGTACTCCGCCTAGATTTATACATGATCTGATTGTTTTGCTCAAGAAGGTTTTCAACCGTACTGGAATAGCCGTGACAACAAAACCAATTGTAATATATCCAAACAGTGGGGAAACTTACGATGCTGAACTAAAACAGTGGGTGCAAAATACTGGTGTTACAGATGAACATTTTATCTCATATGTTACTAAATGGCGTGAGCTAGGGGCTTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCAGCTACTATAAGGAAGATATACAATGTACTGTCTAGCAGTGAATCTGCTATTGTTGGGAAAGAGTGA 1146 0.4328 MSSLLVDLLRQSGGTAVIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKDKGYTDEESEAMLRRSVEIAREARELYYKGCSECCSGDGAEGKILKQRPILIAASVGSYGAYLADGSEYRFVNILESGDYGDAITKTNLKDFHRRRVQILADSGADLLAFETVPNKLEAEFELQSEDIHGLSKYICGFSKEQKAVLVKIAYAELLEEEDIKIPAWFAFNSKDGVNVVSGDSLLECGSIAESCNKVVAVGINCTPPRFIHDLIVLLKKVFNRTGIAVTTKPIVIYPNSGETYDAELKQWVQNTGVTDEHFISYVTKWRELGASLVGGCCRTTPATIRKIYNVLSSSESAIVGKE 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02132 381 Pfam Homocysteine S-methyltransferase 17 369 IPR003726 -
Vian2g02132 381 ProSiteProfiles Homocysteine-binding domain profile. 4 370 IPR003726 -
Vian2g02132 381 FunFam Homocysteine S-methyltransferase 5 369 - -
Vian2g02132 381 PANTHER ZGC:172121 11 374 - -
Vian2g02132 381 SUPERFAMILY Homocysteine S-methyltransferase 9 372 IPR036589 -
Vian2g02132 381 Gene3D - 6 368 IPR036589 -
Vian2g02132 381 PIRSF BHMT 250 310 IPR017226 GO:0008168|GO:0008270|GO:0009086
Vian2g02132 381 PIRSF BHMT 318 379 IPR017226 GO:0008168|GO:0008270|GO:0009086
Vian2g02132 381 PIRSF BHMT 5 115 IPR017226 GO:0008168|GO:0008270|GO:0009086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02132 Vian-Chr2 41177167 41182167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02132 K00547 - gmx:100790567 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02132 2 41177167 41182167 Vian2g02132 2 41177167 41182167 ECH