Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02127 ATGTCTGGACTGATTGAAGGACTTCCTGATGCTGTTGCAATTAGGTGCCTTGCACGGGTTCCTTTCTACCTTCACCCGGTGTTAGAGCTTGTCTCTCGATCTTGGCAAGCAGCTGTTCGAAGCTCTGAACTATTTAGAGCTCGGCAGGAGGTTGGTTCAACTGAGGATCTGTTATGTGTCTGTGCTTATGATCCAGAGAACTTATGGCAGCTGTATGACCCTTTGCGAGATCTCTGGATCAGACTTCCTGTTCTTCCATCAAAGATCAGGCACCTTTCCCACTTTGGTGCAGTTTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGTGATGCTGTTGATCCGTTGACTGGGGACCAAGATGGTTGTTTTGCAACCGATGAAGTCTGGTCATATGACCCTGTAGTCCGACAGTGGGCCCCTCGTGCACCAATGCTTGTCCCACGTTCTATGTTTGCGTGCTGTGTTTTGGAGGGGAAAATTGTTGTAGCCGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGAGAAGGATGTCTGGATTCCAATGCCCGATCTTCATCGCACTCATAATTCGGCCTGTTCAGGAGTAGTGATCGGTGGAAAAGTGCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCAGGGCCCGGGTGGATTGTTGAGGAATGTGCATGGCTTCAGGGTCCGATGGCAGTCGTCCGTGATGCGCTCTATGTGATGAGCCATGGATTAATCCTCAAACAGGACAAAGAAGTGAGAAAAGTTGTGGGTTTCGCATCTGAGTTTCGAAAGAGAATTGGATTTGCAATGGCTGGACTAGGTGATGAGTTATACGTGATTGGAGGCGTCATTGGTCCTGATAGATGGAATTGGGACATTAGGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAATGAGAGACCAACTTGGCGCCAAGCAGCTCCAATGACTTGGTGTCATGGTACTATTCTTGGTTGTACGCTGCTGAGAATTTAG 1038 0.4759 MSGLIEGLPDAVAIRCLARVPFYLHPVLELVSRSWQAAVRSSELFRARQEVGSTEDLLCVCAYDPENLWQLYDPLRDLWIRLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRAPMLVPRSMFACCVLEGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWIVEECAWLQGPMAVVRDALYVMSHGLILKQDKEVRKVVGFASEFRKRIGFAMAGLGDELYVIGGVIGPDRWNWDIRPLSEVDVLTLGNERPTWRQAAPMTWCHGTILGCTLLRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02127 345 SUPERFAMILY Kelch motif 61 331 IPR015915 GO:0005515
Vian2g02127 345 Gene3D - 52 341 IPR015915 GO:0005515
Vian2g02127 345 CDD F-box_AtAFR-like 4 48 - -
Vian2g02127 345 PANTHER OS02G0202900 PROTEIN 3 260 IPR045887 -
Vian2g02127 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Vian2g02127 345 Pfam Kelch motif 278 330 IPR006652 GO:0005515
Vian2g02127 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Vian2g02127 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Vian2g02127 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02127 Vian-Chr2 41138948 41139985 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02127 8 188 Miscellaneous Gene Families AT4G33900 29.474 1.13e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02127 - - gmx:100800954 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02127 2 41138948 41139985 Vian2g02127 2 41138948 41139985 ECH