Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02117 ATGGATTCCGTTGTCCTTCACAGTGTGAGTGCGTCATCAGCGGCGTCGTCGTCGTCTACGTCGTCAATGGCGAAGCGTCCGTGTCCGTCGCAAAACCCTAGAGTGGAGAACCTGAGCGATGTGGAGCGTCTTCTGGACGCGTTTCTCTCCCTCTCCGACCTCCCTTCTCTCTCCCTCGATCTCTCCTTCGAGAGGCTTCTCCAATCTGTCTCCTCTGACTCCGATCTTATCGATCGCGCCCTCAAAATGGGTTCTCTCCTTCTTGACGCCGCCAAACACTCCTCTAGGAAACGCGCTTCCAACCACAATTCCCTCGCCTGGCCCCTCCCTCCCGACCTCACCATCAAGGTGTTCTCAATGCTTGATACCCAGAGCCTGTGCTATGCATCAGCTACTTGTTCAATGTTTAGCAAATGTGCCAAAGATCCTCTGTGCTATACAAATCTTGATTTGACAACACTTGTTCCGAAGGTTAACAATGCAGTAGTTGCCACGATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGCGTTGTCCCTGGCGCTACTACTTCACTTGGATCTTGTCCACCATTTGTTTGTACCATTAGAAATGCTATTGTAGAAGTATCAAACTTTTCATGGAATGATAAGAGGTCTCGACAAGGGAGGGAGTCATCCATTCTCACAAGATGCTGCTTAAGCCCTTTAAGTGGTGACGGTGGTACCCCAGGGGCTCTTTTAAGAAAGTTACACTTGTATAATATTGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCTGCATGCCCATCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTTGAGCTGAGGCAAACATTAATGTCAGTAAGTGCAAACTGCCACTTGATAGAACGCTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCACAAACCTGTTTTGAGCTAGTAAACAATTGTCCTCATCTAACTTCTTTATCCCTTAGAGGGTTTAAGCTACATGATTGCAAAGTTCGTGTATTGGTTAAGGGATTTAGGAAATTGAAGTATGTTGACTTTTCCACGTCTTATTCAATCACTGGTAACTTCTTAAGAAACCTTGGAAGCTGCAATGGGGGAAATTTTCTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTCGCGAGGCTGTTGACTGCAATTCTTGCTGGAGATTTCAAATTTCTTGTACATCTTGATATATCCAATAGGGAAGGTTTAGCATCTGAGGCTGATTGGTATCACAGGTGCTACAACTCTAGTATTATGCCTATAAAAGAGGTTTTGGAAACGAGGCCTGATATGTGTCTGGTGGCTGAATATCCATCAGCAGAAGGAAGTTATATGGAGACATTTGATGCTGATATGAATAGTGAGATAAGTCTGCCCTCACAATTGAGTAGCCACACGTCAGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGAAGTGGCAATGAGGATGGTCAAGATGCCAACTACGTGATATACGAGGAAAGCTCAGATGAGATTGACTTTTTGTCCCTCTAG 1593 0.4476 MDSVVLHSVSASSAASSSSTSSMAKRPCPSQNPRVENLSDVERLLDAFLSLSDLPSLSLDLSFERLLQSVSSDSDLIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSMFSKCAKDPLCYTNLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSLGSCPPFVCTIRNAIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGTPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNFLEVLILRDCMHLKEMEVARLLTAILAGDFKFLVHLDISNREGLASEADWYHRCYNSSIMPIKEVLETRPDMCLVAEYPSAEGSYMETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02117 530 MobiDBLite consensus disorder prediction 492 511 - -
Vian2g02117 530 SUPERFAMILY F-box domain 109 155 IPR036047 GO:0005515
Vian2g02117 530 SUPERFAMILY RNI-like 242 423 - -
Vian2g02117 530 MobiDBLite consensus disorder prediction 15 34 - -
Vian2g02117 530 FunFam F-box protein isoform A 102 403 - -
Vian2g02117 530 Gene3D Ribonuclease Inhibitor 101 405 IPR032675 -
Vian2g02117 530 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 108 397 - -
Vian2g02117 530 MobiDBLite consensus disorder prediction 492 510 - -
Vian2g02117 530 Pfam F-box-like 109 151 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02117 K10268 - gmx:100786317 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02117 2 41026156 41032081 Vian2g02117 2 41026156 41032081 ECH