Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02114 ATGGCTTCTTCCTTCTCCACCCACTGCCACCTTCCTTCTTTCTCTTCTTCTAACCATTTCCTTTTTCCATCTCCATCATCTTCATCATCTTCTTCTTTTATTTCTCTTCACCTCTTCTCCAAATCCTCTCTTGGTTCTGTGTTCTCTGATACCAGCGACAAACAAGAGATAAGATGCAGAGCTATATCCAAGTCACGAACGCAAGAATATTCAGACATATTTCAGGGTGGTCTAACAGTGTTAAAGTTGCCTGATGTTAATGTGGAGGATGACATAGAAGAGGAGCAAGACACTGGGGTTTTGGTGGCAAAAGAGATCAAGAAGAGAGTGAACACTATCAAATCAATATTGAGTTCGTTGGAAGATGGAGAGATAACTGTGTCTGCTTATGACACTGCTTGGGTCGCTCTGGTAAAAGATGTTAATGGAAGTGGTGCTCCTCAGTTTCCAACGAGTCTAGAATGGATAGCAAAAAACCAACTTGAGGATGGATCATGGGGTGATCAGGAATTGTTTTCAGCCCATGATCGGATCATAAACACTTTAGCTTGTGTTATTGCATTAAAATCATGGAATATGCACCCTGAAAAGTGTGAGAAAGGAATGACATTTTTTAAGGAGAATCTTAACAAGCTTGAGGATGAGAATGCGGAGCATATGCCAATTGGGTTTGAAGTAGCTTTCCCATCACTTCTTGACCTGGCTCGTGAGTTGGAGATCGATGTGCCTGAAAATTCCCCAATCCTGAACAAAATCTTTGCAATGAGAAACGTAAAACTCACAAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAAGTCTGCTTCATAGCTTGGAAGGGATGTCAGACCTGGACTGGAAATCACTTCTGAAACTTCAGTCTGAAGACGGGTCTTTCTTGTTTTCTCCTTCTTCCACCGCTTTTGCTCTCATGCAAACCAAAGATCAAAATTGCCATGGTTACTTGAATCAAATCGTCAAGAGGTTCAATGGTGGAGTTCCAAACGTGTATCCAGTGGATTTGTTTGAACATATTTGGGTGGTTGATAGGCTAGAACGCCTAGGAATATCTCGGTATTTTCAGCAAGAGATCAAAGACTGTATAAGCTATGTTTATAGATATTGGACCGAGAAGGGTATTTGTTGGGCAAGAAATTCAGATGTTGAAGACATCGATGACACGGCAATGGGTTTCAGATTACTGAGATTACATGGCCATCAAGTTTCAGCTGATGTGTTCAAACACTTTGAGAAGAACGGTGAATTTTTCTGTTTTAAGGGACAAAGCACACAAGCTGTGACAGGAATGTTCAATCTGTTAAGGGCGAGTCAAGTAATGTTTCCTGGAGAGAAGATTCTAGAAGATGGGAAGAAGTTCTCCTCAAAATTTTTGAAGGAAAAGAGAGAAGCAAATGAGTTAGTAGATAAATGGATTATAATGAAAAACTTACCAGAAGAGGTGGCATACGCATTGGACGTGCCATGGTATGCAAGTATGCCTCGAGTGGAGACAAGATTCTACATTGATCAATACGGCGGTGAGAGTGACGTATGGATTGGCAAGACTCTTTACAGGATGCCCTTTGTGAACAACAACAACTATCTGGAGCTTGCTAAATTAGATTACAACAATTGTCAAGCAATGCATCTAATGGAGTGGGGGAGGATTCAGAAGTGGTACTCAGAATCTAGATTGGCAGAATTTGGAATGAACAGAAGAACTCTTCTGTTGGCTTATTTTCTGGCAGCAGCGAGCATATTTGAACCAGAAAAATCTCATGTGAGGCTTGCTTGGGCCAAAACCACAGTCTTACTTGAGACCATAACATCCTATGTTAGTGATGCAGAAATGAGAAAAACTTTCATGAAAGATTTCAGTGACTGCATTAGCAGGCGTGACTACTCGATTGGCTGGAGGTTGAACAGGAACACAACAGGACATGGACTGGTGAAAACTTTGGTTACGACCATAGATCAAATATCATGGGATATACTTGTTTCTCAAGGTCATGAAATCGGATATGATATGCATCGCGCGTGGGAAAAGTGGCTTTCAAGTTGGCACGAGGAAGGAGACAAATGTGAAGGACAAGGAGAGCTTTTGGCGCAGATAATAAACCTATGTGGTGGGCATTGGATTTCAGAGGATCAAATGTTCGATCCTCAATATGAGACTCTCCTTCAACTCACTAACTCACTCTGCCATACACTCTATTGTCATCAAAAGGACAAGGAATCGGAGAGCATGATATTCCCAGAAGTTGAGTTGCAAATGCAAGAACTGGTGCAATTGGTGTTCCAAAAATCTCCATCTGGCATAGATTTCAATATCAAGAACACTTTTCTCACTGTGGTGAAGACTTATTACTATGCAGCTTTCTGTGATTCAAGGACCACCAACTTCCACATTGCCAAAGTTCTGTTTGATAAAGTTATTTAA 2442 0.4115 MASSFSTHCHLPSFSSSNHFLFPSPSSSSSSSFISLHLFSKSSLGSVFSDTSDKQEIRCRAISKSRTQEYSDIFQGGLTVLKLPDVNVEDDIEEEQDTGVLVAKEIKKRVNTIKSILSSLEDGEITVSAYDTAWVALVKDVNGSGAPQFPTSLEWIAKNQLEDGSWGDQELFSAHDRIINTLACVIALKSWNMHPEKCEKGMTFFKENLNKLEDENAEHMPIGFEVAFPSLLDLARELEIDVPENSPILNKIFAMRNVKLTRIPREMMHKVPTSLLHSLEGMSDLDWKSLLKLQSEDGSFLFSPSSTAFALMQTKDQNCHGYLNQIVKRFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFQQEIKDCISYVYRYWTEKGICWARNSDVEDIDDTAMGFRLLRLHGHQVSADVFKHFEKNGEFFCFKGQSTQAVTGMFNLLRASQVMFPGEKILEDGKKFSSKFLKEKREANELVDKWIIMKNLPEEVAYALDVPWYASMPRVETRFYIDQYGGESDVWIGKTLYRMPFVNNNNYLELAKLDYNNCQAMHLMEWGRIQKWYSESRLAEFGMNRRTLLLAYFLAAASIFEPEKSHVRLAWAKTTVLLETITSYVSDAEMRKTFMKDFSDCISRRDYSIGWRLNRNTTGHGLVKTLVTTIDQISWDILVSQGHEIGYDMHRAWEKWLSSWHEEGDKCEGQGELLAQIINLCGGHWISEDQMFDPQYETLLQLTNSLCHTLYCHQKDKESESMIFPEVELQMQELVQLVFQKSPSGIDFNIKNTFLTVVKTYYYAAFCDSRTTNFHIAKVLFDKVI 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02114 813 SUPERFAMILY Terpenoid synthases 531 791 IPR008949 -
Vian2g02114 813 Pfam Terpene synthase family, metal binding domain 536 695 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vian2g02114 813 Gene3D Farnesyl Diphosphate Synthase 546 813 IPR008949 -
Vian2g02114 813 FunFam Ent-copalyl diphosphate synthase 129 341 - -
Vian2g02114 813 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 102 526 - -
Vian2g02114 813 Gene3D - 129 341 - -
Vian2g02114 813 Gene3D - 112 544 IPR036965 GO:0010333|GO:0016829
Vian2g02114 813 Pfam Terpene synthase, N-terminal domain 286 492 IPR001906 GO:0010333|GO:0016829
Vian2g02114 813 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 297 517 IPR008930 -
Vian2g02114 813 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 104 810 - -
Vian2g02114 813 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 99 306 IPR008930 -
Vian2g02114 813 FunFam Ent-copalyl diphosphate synthase, chloroplastic 546 813 - -
Vian2g02114 813 FunFam Ent-copalyl diphosphate synthase, chloroplastic 321 543 - -
Vian2g02114 813 SFLD Terpene Cyclase Like 1 N-term 102 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02114 Vian-Chr2 40966032 40973502 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02114 K04120 - gmx:100784193 1399.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02114 2 40966032 40973502 Vian2g02114 2 40966032 40973502 ECH