Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02112 ATGGCTTCTCATTTCTCCTTCACTCTCAGTCACACCATTCCTGCATCACGTGCCAGACCTGCTGCTAAATCCTTTCACTCTCTTAGCTTTTACCTTCGATCATCGTATGGTATTTTCAAGGAAATTGTTACTGAAGTGTCTCGGGATAATATCTCGAAGGATGATAATGTCGACGTGGAAGTTCCTAACCAGGAGATACAGAAGAAAATAAAAATGGTAAAATTAATATTGGATTCGAAGGAAGATGGAGAAATAACAATATCAGCATATGACACGGCATGGGTTGGTCTGGTGAAAAATGTTGGGGACACGAATTCTCCTCAGTTCCCTTCCTGTCTTGAATGGATTGCGAATAATCAGCTGCATGATGGTTCCTGGGGAGATGCTGAATTATTCATTGCCCATGATCGTATTCTTAACACGTTAGCTTGTGTGGTAGCATTAAGATCATGGAACATGCACCCCCAGAAGTGTGAGAAGGGAATGCAGTTTTTTAAGGAGAATTTGTACAAGCTTCAGGATGAAAATCCAGAACACATGCCAATCGGGTTTGAAGTTACTTTCCCTTCTCTTCTCGATTTAGCTAGATGTTTGGATGTTGAAGTGCCAGATGACTCTCCTATCTTGAAAAACATCCTTGCAATGAGAGACCTGAAGCTTAAAAATTTGGAGGGAATGCAAAACTTGGACTGGAAACAGCTACTGAAGTTGCAGTGCCAAGATGGGTCATTCTTATTCTCTCCATCCTCCACAGCTTATGCTCTCATACAAACTAAGAATGAAAGTGCTCACAAATACCTGGATAAAACACTCCAGAAGTTCAATGGGGGAGTTCCTAATGTCTACCCGGTGGATTTGTTTGAACACACATGGATCTTCGACAGACTTGATCGTCTTGGAATTTCAAGATATTTTCAGTCAGAAATCAAAGATTGTGTGACCTATGTTTCAAGGAATTCAGAGGTTCAAGATATAGATGACACAGCAATGGGATTCAGACTTCTAAGGTTACATGGCCACCAAGTTTCATCCAGTGTGTTTGAGCACTTCAAGAAAAATGGCGAATTCTTCTGTTTTTCTGGACAGTCAAACCAAGCTGTGACAGGGATGTTCAATCTCTACCGAGCATCTCAATTACTATTTCAAGGAGAGGAGATTCTTGAGGATGCCAAGAACTTCTCAACCAAATTTTTAACTGAGAAACGTGAAGCAAATCAGCTCCTAGATAAATGGATCATTACCAAAGATTTACCTGGCGAGGTGAGTTATGCTCTGGACGTCCCCTGGTATGCTAGTCTGCCAAGAATGGAGACAAGATTTTACCTTGAACAATATGGTGGTAGCAGTGACGTTTGGATTGGCAAGACCCTTTATAGGATGCCTTTCGTGAACAATGATGTTTATCTCGAGCTTGCAAAATTGGACTACAGCATCTGTCAAGCAGTGCATTGTGTAGAATGGGAAAAAATCCAAAGGAAGTTGAACAAGAAGAAGAAGAAAGAGGAAGAACTCCTGGAGATTTTGCTGACAAACCTTGATTACCTTGGGTTCGAAATGCTTCGTAGTCATGGTCGTGAATTATCACATTATTTGAATCAAGCAGGTTGGCTATCAAGTTGGCAGAATGAAGGGAACAGCTTGGAAAGAGAAGCTGAGCTGATTGTGCAAATCATAAATGTAATGGCTGGCTATTGGTCAGAAGAACTGCGGCTCAATCCACAGTACCAGAGGTTGCTCCAAACCACTAATAGAGTCTGCCATGGCCTCCGTAATTATCAAATCAGCAAGGCACATGATAGTGGAAGCAACAAGAGGATAACCTGCATGACTACCCATCAAATAGAATCAGACATGCGAGAACTTGTGCAATTGGTGCTCCAAAATTCCTCAGATGGTGTGCACACCAATGTGAAGAATTCATTCCTCACAGTGGCCAAGGGCTTCTATTACGGAGCATATTGTGACCCAGAGACCATAAACTCTCACATCCAGAAAGTGCTCTTTGAAAAAGTGATGTAA 2019 0.417 MASHFSFTLSHTIPASRARPAAKSFHSLSFYLRSSYGIFKEIVTEVSRDNISKDDNVDVEVPNQEIQKKIKMVKLILDSKEDGEITISAYDTAWVGLVKNVGDTNSPQFPSCLEWIANNQLHDGSWGDAELFIAHDRILNTLACVVALRSWNMHPQKCEKGMQFFKENLYKLQDENPEHMPIGFEVTFPSLLDLARCLDVEVPDDSPILKNILAMRDLKLKNLEGMQNLDWKQLLKLQCQDGSFLFSPSSTAYALIQTKNESAHKYLDKTLQKFNGGVPNVYPVDLFEHTWIFDRLDRLGISRYFQSEIKDCVTYVSRNSEVQDIDDTAMGFRLLRLHGHQVSSSVFEHFKKNGEFFCFSGQSNQAVTGMFNLYRASQLLFQGEEILEDAKNFSTKFLTEKREANQLLDKWIITKDLPGEVSYALDVPWYASLPRMETRFYLEQYGGSSDVWIGKTLYRMPFVNNDVYLELAKLDYSICQAVHCVEWEKIQRKLNKKKKKEEELLEILLTNLDYLGFEMLRSHGRELSHYLNQAGWLSSWQNEGNSLEREAELIVQIINVMAGYWSEELRLNPQYQRLLQTTNRVCHGLRNYQISKAHDSGSNKRITCMTTHQIESDMRELVQLVLQNSSDGVHTNVKNSFLTVAKGFYYGAYCDPETINSHIQKVLFEKVM 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02112 672 Gene3D - 73 476 IPR036965 GO:0010333|GO:0016829
Vian2g02112 672 Coils Coil 491 511 - -
Vian2g02112 672 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 492 670 - -
Vian2g02112 672 Pfam Terpene synthase, N-terminal domain 230 425 IPR001906 GO:0010333|GO:0016829
Vian2g02112 672 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 101 256 IPR008930 -
Vian2g02112 672 Gene3D - 89 285 - -
Vian2g02112 672 SFLD Terpene Cyclase Like 1 N-term 61 459 - -
Vian2g02112 672 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 241 449 IPR008930 -
Vian2g02112 672 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 61 459 - -
Vian2g02112 672 Gene3D Farnesyl Diphosphate Synthase 478 672 IPR008949 -
Vian2g02112 672 FunFam Ent-copalyl diphosphate synthase, chloroplastic 263 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02112 Vian-Chr2 40934017 40939669 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02112 K04120 - gmx:100807519 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02112 2 40934017 40939669 Vian2g02112 2 40934017 40939669 ECH