Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02098 ATGGAAGCAACGCGATTCTCCGCTAATCACTTCCTCCCACACTTCTTCCAAACCAAACACAACGCTTCCAGAGAAAGAAGATACGTAAAATGCATCAACGGAATTGGTACTAGGGTTTCGCTTTTCACAATCCCCGCGTTCAGCACAAGGATTTCTCCTTCGCGGAACCGGACTCTTTCTGTTAACTTCTCCGACAGGCTCCGGAGTGATTATGCACGCGTCGACGCTCTGAAGGATGAGCTTCCCAACGAGGAGGTTGTTCCCGCGATTCGAGGAGGGGAAGCGGCTGTTGCGTTGTCTCCGGAGTTTGATAAGTCGGTAACCTCGCAATTGAAACCTGTAATGTTCAGAAACAGGTTTCTGAACTTCGTGCGGTTGGGTTCCGTGGTAAACGGTGCGGCTGAATCCTTTTTCAAGAGCGAGATTAGGAGGAGGTTGTTCGTGACGGCGGTGCTGATTGTGATTAGTCGCGTTGGTTATTTTATTCCTCTTCCAGGGTTTGACAGAAGGTTGATACCGGAAGACTACCTGAGCTTTGTGTCAGGATCATCTGTTGGTAAGTTGCATTCTTCTGTGAATCTCAAGCTATCTATTTTCCAGCTTGGTATTAGTCCTCAGATAATAGCGTCCATTATTATGCAGGTACTCTGTCATGTTGTCCCTTCGCTAGTAAAGCTACGAAAAGAAGGTCTGGATGGGCATGAAAAGATTAAGAGTTATATATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAATAGTTTCTTGCTACTCACTTCCATATTCAATTTATGCTGCCAGTTACAGGGTCAAACATGTAATGCTGACATCAGTTTTATTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACTATATCAGAATCTGGATTTGGTCAAGGCTCGTCTTTAATCATATGTGTGGGAATCCTTACGGGGTATATGGAAACATTATACAAGATGCTTACTCAGCTTTCAGTGAGTGCTGTGAGCTGGTGGCCATATGTGCTTGCCGTATTGGGTATCTTCACCGTTGTCACTATGTGGGCAGTTGTAGTAACAGAAGGTTGTAGGAAAGTAAAGCTGCAGTACTATGGTTTTAAACTTGCTTCTGCAGCAAGAGAGCAATCGCCTATTACAGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAGCCTATTCTTACCACCTCTTACCTCTTGGCACTTCCGAGCATTCTTGCAAGTCTGCTGAGTTCACCTTTTTGGGAGCACGTCAAGGAAATATTGAACCCTGAAAATTCTGTCGGTGCTGAGCCATGGGTTTACTATTCCATATATGCTTTTTTTGTCTTCCTGTTCAATATATTTGACATTGCTAACATGCCAAAGGAAATTGCGGATTATTTAAATAAGATGGGTGCGAGAATACCAAACATAAAGCCTGGGAAGGCTACCATAGAATACCTCACCAAGGTTCAGGCATCCACACGATTTTGGGGGGGGCTACTGTTAAGTGTTCTGGCCACTACATCAAGTGTTCTTGACCACTATTTGCGGCGTGTCAATGCTGGGTTTGCCATTGGTTTTACATCAGTTCTAATCATTGTCGGTTCCATTATTGAACTCAGAAGATCATATCAAGCATATAATGTGATGCCAAGCTTAAAACCGAAGACGGATTACGCAGAAATCTATACAGCATTAGATGCCTTGGACGCCTCCTCCATCTTTCACACCTTCTACGACGTCGTAGGGTTTGTTCTTTACATGCACCAGCAAATCCCCTCCACTGTGCAGGATATGGCCATCGAATTTGAAGCGATGCATTCGGAGTACAAGGAGCTGGAAACGGAGTTGGGAACTGAGGTGAAGCCATCGTTTCGGAGAAAGCATGTTAGCAAAATGAGGGATATCAAGGTAGGAATTAAGAGATTGGATAAGTTGATGAATTCACTTTTGAATTTGCAAACCGCGTTTAAAATCGTGATCGACGAGGTTCCTACCATAGACGGTGTCGTTTTGGCGCTTGGAGCTAGCCCACTTCGACCTCAGCATATTTATGAGTTGAATTTTTCCCATTCGATTGGTGTTTCCAAGGGTGCTAATGATTTTGCTAGGAGTAAAGCGGCTGAGAGTCTTTCGAGAAAGGCGATTCGGACACTGATATCGAAAGGTGCTGGCTCTGTGACCTATCCCGGCCCTATCAGATTGTTTGTGTTGATAAAGGCCCCATCTTCTTTCAATCAGCCTTTGCATTTTCTGCCTAAACGCGATTTTAGGGCACCGTGTGCTGTATTTGTTAGTGGAGCCTTTCTGATTCTCACTATTTCTTTATTTGGTGAAATAGCAAGTGGGGAGGGGGCTCAAGAACGGTTGGACCAGGAAAGTGTTTTGGAGTTAGTCCTTTTGAAAACTCTTAATTTAGTAAGCATCCCCACGGTTGTGCCTCTCGGGCTACTGTTTAAGTGCAGAAATCAGAATCAGGAAGTGGACGCTACTGCTTCAGAAGATTTAATCTGGTCAGGGGACTGTTAA 2538 0.4425 MEATRFSANHFLPHFFQTKHNASRERRYVKCINGIGTRVSLFTIPAFSTRISPSRNRTLSVNFSDRLRSDYARVDALKDELPNEEVVPAIRGGEAAVALSPEFDKSVTSQLKPVMFRNRFLNFVRLGSVVNGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPEDYLSFVSGSSVGKLHSSVNLKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSFGFAILEALIVSCYSLPYSIYAASYRVKHVMLTSVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTVVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPILTTSYLLALPSILASLLSSPFWEHVKEILNPENSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLTKVQASTRFWGGLLLSVLATTSSVLDHYLRRVNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLKPKTDYAEIYTALDALDASSIFHTFYDVVGFVLYMHQQIPSTVQDMAIEFEAMHSEYKELETELGTEVKPSFRRKHVSKMRDIKVGIKRLDKLMNSLLNLQTAFKIVIDEVPTIDGVVLALGASPLRPQHIYELNFSHSIGVSKGANDFARSKAAESLSRKAIRTLISKGAGSVTYPGPIRLFVLIKAPSSFNQPLHFLPKRDFRAPCAVFVSGAFLILTISLFGEIASGEGAQERLDQESVLELVLLKTLNLVSIPTVVPLGLLFKCRNQNQEVDATASEDLIWSGDC 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02098 845 Gene3D SecY subunit domain 130 555 IPR023201 -
Vian2g02098 845 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 136 553 IPR002208 GO:0015031|GO:0016020
Vian2g02098 845 FunFam Preprotein translocase subunit SCY2, chloroplastic 130 555 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 272 297 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 529 547 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 396 415 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 298 321 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 196 216 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 146 164 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 441 463 - -
Vian2g02098 845 PRINTS Preprotein translocase SecY subunit signature 237 260 - -
Vian2g02098 845 Gene3D - 557 842 - -
Vian2g02098 845 SUPERFAMILY Preprotein translocase SecY subunit 128 550 IPR023201 -
Vian2g02098 845 Pfam SecY 197 543 IPR002208 GO:0015031|GO:0016020
Vian2g02098 845 Coils Coil 599 619 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02098 57 556 Miscellaneous Gene Families AT2G31530 74.455 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02098 - - gmx:100803256 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02098 2 40726627 40737860 Vian2g02098 2 40726627 40737860 ECH