Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02082 ATGTTGCATGAGCAGAGGGTGGGTATGATGGAGTTCCGACCAGGGAATTTCGTCTACGATGCTGAGGATATTCCATTTGGGACTCTCTGGTGGTTCTTTTATGCTGGAATTTCTTGTTTGCTTGTTCTCTTCGCTGGGATTATGTCTGGTCTTACTCTTGGATTAATGTCTCTGGGTCTCGTTGACCTTGAGATTCTCCAGCAGAGTGGTTCTTCCACCGAGAAGAAACAAGCTGCTGCTATTTTGCCCGTTGTTCAGAAGCAGCATCAGTTGCTTGTCACCTTGCTTCTTTGTAACGCCTGTGCCATGGAGGCACTTCCAATTTACCTTGACAAAATTTTTCATCCGTTTGTAGCAGTACTGTTATCTGTGACTTTTGTTCTCGCTTTTGGAGAGGTTATCCCACAAGCTATATGCACGAGATATGGGCTCTATGTTGGTGCTAATTTTGTGGGGCTTGTACGTGTTCTGATGATAATCTGTTATCCAATTGCTTTTCCTATTGGAAAGGTTCTGGATATTTTACTTGGTCATAGTCATGCATTATTTAGACGAGCACAGTTGAAAGCCCTTGTCTCAATCCATAGCCAAGAGGCTGGTAAAGGTGGTGAACTCACTCATGACGAGGCAACGATTATCAGCGGAGCATTAGATCTCACGGAGAAGACTGCTGAGGAGGCCATGACACCAATTGAATCTACATTTTCCTTGGATGTGGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTTCACGAGGTCATAGTCGTGTTCCTGTATACAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAGAACCTTCTTACTGTAAGAGCTGAAACAGAGACCCCAGTCAGTGCTGTTTCCATCCGGAGAATTCCAAGAGTTCCAGCAGATATGCCTCTCTATGATATCCTCAACGAGTTTCAAAAAGGAAGCAGTCATATGGCAGCTGTAGTCAAGGTTAAACGAGAGACAAAGTACCCTCTGGCAACTGGTAACATTGAGAAATCCAAGGATAAAGAAGTCATAAAGCAGAGTTCTCAACTAACTATGCCATTACTAGCCAGGTTTTACGAGAAATCAGAAAAGGTTGTCAATATTGACAAACTCTCTAAGCATGCTGCAGAACAACAATTTCAGAAGGATGTCACTGCAACAAATGGTTCCCACCACTCTCTTGACAATGTTGACGATGGGGATGAAGTTATTGGAATCATTACCTTGGAAGACGTGTTTGAAGAACTCCTTCAGGAAGAAATTGTGGACGAGACTGATGTGTATATTGATGTACATAGAAGAATACGTGTGGCTGCTGTAGCAGCTGCTACATCTGTGGCACGGGTTCCTTCTGGCCGAAAGTTGGCAGGTCAAAAGCCTGTAGCAATTCAGAATCAGGGGAATTGA 1419 0.4348 MLHEQRVGMMEFRPGNFVYDAEDIPFGTLWWFFYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQQSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVLLSVTFVLAFGEVIPQAICTRYGLYVGANFVGLVRVLMIICYPIAFPIGKVLDILLGHSHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILSRGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVKRETKYPLATGNIEKSKDKEVIKQSSQLTMPLLARFYEKSEKVVNIDKLSKHAAEQQFQKDVTATNGSHHSLDNVDDGDEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAATSVARVPSGRKLAGQKPVAIQNQGN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02082 472 PANTHER METAL TRANSPORTER CNNM 17 445 IPR045095 GO:0010960
Vian2g02082 472 ProSiteProfiles CNNM transmembrane domain profile. 27 209 IPR002550 -
Vian2g02082 472 FunFam DUF21 domain-containing protein At4g14240-like 209 346 - -
Vian2g02082 472 Gene3D - 339 428 IPR046342 -
Vian2g02082 472 Pfam Cyclin M transmembrane N-terminal domain 37 208 IPR002550 -
Vian2g02082 472 SUPERFAMILY CBS-domain pair 213 422 IPR046342 -
Vian2g02082 472 CDD CBS_pair_CorC_HlyC_assoc 223 324 IPR044751 -
Vian2g02082 472 Gene3D - 209 338 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02082 Vian-Chr2 40535921 40541198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02082 K16302 - gmx:100777230 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02082 2 40535921 40541198 Vian2g02082 2 40535921 40541198 ECH