Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02065 ATGAGAGGAATACAGTTACCGTTAAGCCAAACTCAGAAGGTTCGTCTTCAGAAGACTCTTGAACAGTTAGAATCTCTCTCGTCGAAGGTCAATTCCGATGCTTCCGTCATCATCGCTGATTCCATTCCCGTCAACCACGAAGACGGAGTCCTCAAGGGACACGGAACCGCCGATCTCAACGGCGAAGTCGTTGCCACCGTCTGCGGCGTCGTTGAGCGCGTGAACAAACTTGTCTACGTCCGCGCTTTACGCTCCAGGTATAAGCCAGAGGTTGGTGACATTGTTATAGGACGTGTTGCTGAGGTTGCTCAGAAGCGCTGGAGACTGGATATAAATTTCAATCAGGATGCAGTTTTGATGCTTTCTTCCATGAATATGCCTGATGGGGTCCAGAGGCGGAGGACAGCGCTGGATGAGCTAAACATGCGTTGCATTTTTGAGGAGAATGATGTTGTCTGTGCTGAAGTTCGGGGTTTCCAGCATGACGGCTTACACCTTCAAGCTAGGAGTCGGAAATATGGAAAGCTTAATAGAGGTCAGCTGCTTACAGTCCCACCTTATCTAGTGAAGAGACAGAAACAACATTTCCATCATCTGGAGGAGTTTGGCGTCGATTTGATACTTGGCTGTAACGGATTCATATGGGTTGGGGAACATATTGAAGCCAAAGATGACATGGTAGAAGATCAGGTGAGCCAATCCGATCCACCAGTTTTACTGCATAACAGTGCAAGTCTTGAAGAACAAGAAAAAAATTATACGATATTGGAGATCAGAAAATATATTTGCAGAGCAGCTAATGCTGTTAGAGTTCTATCAATCTTAGGCTTCAATGTTACATTGGAAATAATCAAGGGAATTATTGATCTAAGCCTATCTATGAATCTTGATATACATGAGATGCTTGGTTCTGAATTCTGTGTTCTGGTTGCTGAAAAAGAGGCAGAAAGGAGGAGCTCAAATAAAAAGAAGCGGTAG 978 0.4468 MRGIQLPLSQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLNGEVVATVCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVAEVAQKRWRLDINFNQDAVLMLSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQLLTVPPYLVKRQKQHFHHLEEFGVDLILGCNGFIWVGEHIEAKDDMVEDQVSQSDPPVLLHNSASLEEQEKNYTILEIRKYICRAANAVRVLSILGFNVTLEIIKGIIDLSLSMNLDIHEMLGSEFCVLVAEKEAERRSSNKKKR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02065 325 Gene3D - 36 87 - -
Vian2g02065 325 SUPERFAMILY Nucleic acid-binding proteins 85 176 IPR012340 -
Vian2g02065 325 FunFam Exosome complex component RRP4 87 177 - -
Vian2g02065 325 PANTHER PNAS-3 RELATED 32 317 IPR026699 GO:0000178|GO:0003723
Vian2g02065 325 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 320 IPR036612 GO:0003723
Vian2g02065 325 CDD KH-I_Rrp4_eukar 179 315 - -
Vian2g02065 325 SUPERFAMILY Ribosomal L27 protein-like 44 82 - -
Vian2g02065 325 Gene3D - 88 177 IPR012340 -
Vian2g02065 325 Pfam KH domain 179 219 IPR004088 GO:0003723
Vian2g02065 325 CDD S1_Rrp4 86 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02065 K03679 - gmx:100776358 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02065 2 40370268 40372065 Vian2g02065 2 40370268 40372065 ECH