Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02037 ATGAGCTCCCCCGTTGGGGCCACGGGCGAAATTCAGCGTGGACGAAAGGAAAACCATCCAGTGAGTCGCAACTACACAAGCAATGCGACTGGTAGATTTTGCACTGCTGTCGACATGAAGGAGAAGAAGAATACCGCTTCTACTCTCAAGCGTATTTTAGTGAATTGTGCATCTGAGGCAAAAGCATATGGGAGCTGTGTTGCAGTGAAGGTTCCAGACATTGAACGTGATATGTGTGTGAACGAATTTCTGGCACTAAAGAGTTTTGTTATTTTTCATCCGCTACACATTGTGTTAACAACGGAACATAACATGTCTGGAAAAGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACACGCTTACATTCATTATCCACCACTTCGGTGCAATGTTCCTGGATCTAGTGGATTATTTTATGATGATGGAAATAAGTTGGTACTCTCTCCAACAGTTGACCAGGTCTTTTCATGGAAAGTTGGTCTCTTTGACCCTCTAATTGATCAAACCGCTGACTCAATAAGTGAAGGCCCTATTATAGCTATTCGATATTCTTTAGACACAAAGGTAATAGCAATCCAGCGATCAAACCATGAGATGCAGTTTTGGGATAGAGAGACTGGGGGTACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATACTTGGGTTTTTTTGGACAGATAGTCAACAGTGTGATATTGTTCTTGTTAAGACAAGTGGTCTAGACTTGTATGCTTATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGATTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCCATGGCTTTCAGATTTCGTCTGCAGATATTGTTCGTTTGCCAAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAATAAGCCTGTTTTAGCAGCTGAAGATGTCTTTATTGTCACTGTTTATGGTAGGATATACTGCTTACAAGTTGATAGAGTTGCTATGCTGCTCCATTCTTATCGGCTATATCGTGATGCAGTAATACAGCAGGGCTCTTTTCCAATTTATTCCAACAGGATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCTAGAGCACCAATATCTGCACCACTTCCTCTATTATTAAGGGGATTCCCCAGATCCAGCACTTCATCTCAATCTAGTGGCAGAGAAAGTGAGAGTTCTGACAGTAATATTTTGAGTAATCATGCAGCAGTTACATACTCCAATGCATGGACTTTCCTAGTGCCTGACCTTGTGTGTGATGTGGCCAATAAGTTATTGTGGAAGTTCAATTTAGACATAGAGGCAATTTCTGCCAGTAGCTCAGAGGTCCCATCTGTATTAGAGTTCCTGCAGCGGCGGAGGTTGGAAGCTAACAAGGCTAAGCAATTGTGCTTGGGTATTACACGTACGCTCATTCTAGAGCACAGGCCTGTGCCCGTGGTTTCCAAGGCTGTAAATGTACTAGTCAGCTCATACTCCCATTCAATTAAAACTGGTAACTATCTTAAGAGACTGAAACCAGAAAAGACATCAACTTCTGTTGATCAAAATACTGGCGCTGAGGTATCTGCTATCGAAAGAGATTTAATTGGAAAATCAATCATTCATGAGTCTATGGAAAGAGTCAACAGTGGATCTCTTAATAAAGCTTCAACTGTTTCAAGTTTGGATTCTGATGATGAGTCTCAGTCTGCACATCCAAAACACAATTCAAAGGATGCCCACAGTGCTTATGTTATGCAACCATCTCTTCAATCTGGGCAAGAGGAATCCCAACTTACTACCGCAGCAATTTCACCAGATGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAAAAGATACGTGTACTCCCAAATGTGTATGTATTAATTATTCAGCTTCTGGCTCGCAATGAACGTTATGCAGAGCTCGGGTTGTTTGTCTTAAACAAGATTCTGGAGCCATCTAAGGAAGTCGCACTTCAACTCCTAGAGTCTGGTCGCCAGAATGCTCAGACTAGGAAGCTTGGTCTTGATATGCTGAGACAATTAGGTTTACATCATGATTATGTTTTGCTGCTTGTGCAGGATGGATACTACCTTGAAGCCTTAAGATATGCACGGAAAAACAGGGTGGATAGCATCCGGCCCTCATTGTTCTTAGAAGCAGCATTTGTTTCCAACGACTCTCAACATCTTGCTGCGGTTCTAAGGTTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCGGACCATAATAGATACTGCCGTATACTGAATGAAATGAACTCATCCATAACTGTTTGA 2484 0.4159 MSSPVGATGEIQRGRKENHPVSRNYTSNATGRFCTAVDMKEKKNTASTLKRILVNCASEAKAYGSCVAVKVPDIERDMCVNEFLALKSFVIFHPLHIVLTTEHNMSGKASTSKPNIGLSGSDGLSHAYIHYPPLRCNVPGSSGLFYDDGNKLVLSPTVDQVFSWKVGLFDPLIDQTADSISEGPIIAIRYSLDTKVIAIQRSNHEMQFWDRETGGTFSHKCRPESESILGFFWTDSQQCDIVLVKTSGLDLYAYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANNKPVLAAEDVFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSFPIYSNRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTSSQSSGRESESSDSNILSNHAAVTYSNAWTFLVPDLVCDVANKLLWKFNLDIEAISASSSEVPSVLEFLQRRRLEANKAKQLCLGITRTLILEHRPVPVVSKAVNVLVSSYSHSIKTGNYLKRLKPEKTSTSVDQNTGAEVSAIERDLIGKSIIHESMERVNSGSLNKASTVSSLDSDDESQSAHPKHNSKDAHSAYVMQPSLQSGQEESQLTTAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRVLPNVYVLIIQLLARNERYAELGLFVLNKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKNRVDSIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSDHNRYCRILNEMNSSITV 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02037 827 MobiDBLite consensus disorder prediction 587 601 - -
Vian2g02037 827 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 123 821 IPR040371 GO:0010506|GO:0035658
Vian2g02037 827 MobiDBLite consensus disorder prediction 587 615 - -
Vian2g02037 827 MobiDBLite consensus disorder prediction 1 24 - -
Vian2g02037 827 Pfam Colon cancer-associated protein Mic1-like 660 800 IPR009755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02037 K24763 - gmx:100500389 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02037 2 40061310 40075681 Vian2g02037 2 40061310 40075681 ECH