Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02030 ATGATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAGCTAGTTCACCGCTTGCTCTCCCAAAACCTCCCATCCAATTCCCCTCCTCTAAACCCTAACTCACCCGAATTCCGCAACTCTCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACTCCCTCCGTCGCTCCGGACGCCGCAGCCATCGCCGACTCCATCAAGCGCCGCCTCGCCACTCACGCTCGTTCCGCGGACGCCCTCTCCTTTGCCGACCTCTTCTCCAAATTCGCCTCCAAAGCCCAAAGCGTCAACAACAAATGGGCCGTCATCTACCTCCTAAAAATCATCTCCGAAGATCGCCACAAGACCGCCGCCATCCCCGCCACCACCACACCTCTCTTGCCCAACCTCGCTTTCTCCGAACCCGCTTCGAACAAGGGCTGGAGCAACGGCGTTTTACTTGTCTCCAAGGATCCCGAGAACCGCCGCGAAGTCGCGTTTCGGGAGTTCGTGAATTTGGTCAAGGAAGAAAACGAGGTGTTGGAAGAGGTTATCGTCAGGGACGTGCTCTATGCTTGCCAGGGGGTCGATGGTAGGTTTGTGAAATTCGAGAGTGATAGTAAGCGTTATGTGATACCCGATTCGGTTAGGGTTCCGAGAGCCACTAGGAGTATGGTTCATAACCTTTGTGAATTGGGTGTTTTGTTTCGGAAGGTTAGTGGTTACATTTCGCAGAGTATGGATCGGTTTCCCAATGAAGACGTGGGAACCGTGGGACAAGCTTTTTGTTCTGCTTTGCAGGATGAGCTTAGTGAGTACTACAAGTTGTTGGCGGTTCTTGAGGCTCAGGCTTCGAACCCGATTCCTCTGGTGTCCGAATCTGCGAGTTCTGGGAACTATCTATCGCTGAGGAGATTGGCGGTTTGGTTGGCTGAGCCGATGGTGAAGATGAGGCTGATGGCGGATTTGGTTGAGAAGTGTAGGGTTTTGCGCGGCGGGGCTATGGCGGGGGCGATTCATTTGCACGCACAGCATGGTGATCCGATGGTTCATGAGTTTATGAGGAGGTTGTTGCAGAGAGTGTGTTCTTCGCTGTTTGAGATGGTGAGGAGATGGGTTTTGGAAGGGGAGTTGGAGGATATATTTTCTGAGTTTTTCATTGTTGGGCAGCCTGTTAAAGCTGAATCACTTTGGAGAGAAGGGTATAGGCTTCATCATGCGATGCTTCCTTCGTTCATTCCGCCTTCACTTGCGCAGAGGATCTTGAGGACTGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGTGAGGATCGCGGTTGGGCGGATGCTGCGACTGAGGTTATCACTGATAATGAAGTGACAGCAAGAAGAGGTGGTTTTGGGTATGGGGAAACCGATACCCTTGAGTTATTGGTAGATAAAGCTGCAAAAAGGATCGACAAGCATTTGTTGGATGTGATTTTCAAGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCAGTATTTGTTGCTTGGCCAAGGTGATTTTGTGCAGTATCTTATGGATATTGTGGGACCTGACCTTTCTGAGCCAGCTAACACTATTAGCTCTTTCAAACTTTCGGGATTGCTGGAAACTGCAATTAGAGCATCTAATGCTCAGTATGAGGATCCTGACATTTTGGATAGGCTCAGGGTTAAAATGATGCCACATGAGAGCGGTGATAGAGGCTGGGATGTATTTTCGTTGGAATATGATGCAAGGGTTCCACTTGATACAGTGTTCACAGAGTCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTTCTTTGGAAGCTTAAAAGAGTGGAACATGCGCTTACTGGTGCCTGGAAAACCATGAAACCAAACTGCATTACTTCTAATTCCTTTACAAGATTGCAACATGCAGTCAAGATGCAGTTAGTTTCAACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTACAATATTATATAATGTTTGAAGTGCTGGAGATATCATGGTCAAATTTTTTGGCGGAGATTGAAATAGCCAAGGATCTTGATGATCTACTTGCAGCTCATGAGAAATATCTACATTCTATTGTAGAGAAATCTCTCCTTGGAGACCTTTCCCAGTCTCTTTACAAGTCACTACTTGTAATATTTGATCTTATATTACGTTTTCGGAGCCGTGCAGATCGATTGTATGAAGGTATTCATGAGTTACAAGCAAGAATCACTGAATCCTCCCTATCCTCTCGAGACCAGAATAAAACACGATCACGAAAGCAGTTGAATGATAAAAATGCAGATACAGGATCCTGGATTGTTGATGGGAGAAAAGCACTAACACAACGTGCTGGTGAATTTCTACGAAATATGGGACAAGATCTTGATGCAATTGCTAAGGAGTATTCATCATTGCAAGAGGAATTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGATCTAAAATTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTACAGGCGGTTATGTCCTAGCGTGTAG 2538 0.4645 MMEEEEDQQKLPDLVKELVHRLLSQNLPSNSPPLNPNSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATHARSADALSFADLFSKFASKAQSVNNKWAVIYLLKIISEDRHKTAAIPATTTPLLPNLAFSEPASNKGWSNGVLLVSKDPENRREVAFREFVNLVKEENEVLEEVIVRDVLYACQGVDGRFVKFESDSKRYVIPDSVRVPRATRSMVHNLCELGVLFRKVSGYISQSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAVLEAQASNPIPLVSESASSGNYLSLRRLAVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPMVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFSEFFIVGQPVKAESLWREGYRLHHAMLPSFIPPSLAQRILRTGKSINFLRVCCEDRGWADAATEVITDNEVTARRGGFGYGETDTLELLVDKAAKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPDLSEPANTISSFKLSGLLETAIRASNAQYEDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLAEIEIAKDLDDLLAAHEKYLHSIVEKSLLGDLSQSLYKSLLVIFDLILRFRSRADRLYEGIHELQARITESSLSSRDQNKTRSRKQLNDKNADTGSWIVDGRKALTQRAGEFLRNMGQDLDAIAKEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYRRLCPSV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02030 845 Coils Coil 261 281 - -
Vian2g02030 845 Pfam Gamma tubulin complex component N-terminal 184 487 IPR041470 -
Vian2g02030 845 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 12 838 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Vian2g02030 845 Gene3D - 492 837 IPR042241 -
Vian2g02030 845 Coils Coil 792 812 - -
Vian2g02030 845 Pfam Gamma tubulin complex component C-terminal 493 838 IPR040457 GO:0043015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02030 Vian-Chr2 39962576 39965218 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02030 K16570 - gmx:100784710 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02030 2 39962576 39965218 Vian2g02030 2 39962576 39965218 ECH