Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02027 ATGTCTGTAATAGGGGCGTGTTCACAGTTTCTTTACGGAGAGGTTTATCAGAGAGATGAACAGTGGGCACAGTGCTTGGTGAGTGGGAGAGGGTATCTGTTTTGTCGCAGGAGTGGTGGGTGTGGGAACATATGGGTTGGAAGCAGAAAGAGAGAAAGGAAGATGAAAAGAAGAAATTTTCGCGTGGAAGCTATGTGGCCAGATTTGTCAAAACCAAGTGAAGTTGAGATGGAAGAAATCACTGATTCCGACCACCTCGATCAAATTCTTCTTCTTGCCCACGACAACTCACAACCTATCCTCATTGATTGGATGGCTACTTGGTGTCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCAGCTGAATATCTCGATAAAGTCAAATTTTATTACGTGGATGTGAATAAAGTACCCCAGACTCTAGTCAAGAGAGGAAACATATCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGAGAGATGAAGGCAGAAGTGATTGGGGGCCATAAGGCCTGGCTAGTTACTGAAGAAGTCAGAGAAATGATCCAAAAGTTCTTATGA 570 0.4298 MSVIGACSQFLYGEVYQRDEQWAQCLVSGRGYLFCRRSGGCGNIWVGSRKRERKMKRRNFRVEAMWPDLSKPSEVEMEEITDSDHLDQILLLAHDNSQPILIDWMATWCRKCIYLKPKLEKLAAEYLDKVKFYYVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVTEEVREMIQKFL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02027 189 Pfam Thioredoxin 95 173 IPR013766 -
Vian2g02027 189 CDD TRX_family 84 186 - -
Vian2g02027 189 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 48 188 IPR044253 GO:0009570
Vian2g02027 189 FunFam Thioredoxin 73 189 - -
Vian2g02027 189 ProSiteProfiles Thioredoxin domain profile. 60 189 IPR013766 -
Vian2g02027 189 SUPERFAMILY Thioredoxin-like 73 185 IPR036249 -
Vian2g02027 189 Gene3D Glutaredoxin 68 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02027 Vian-Chr2 39948098 39949275 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02027 - - gmx:100783648 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02027 2 39948098 39949275 Vian2g02027 2 39948098 39949275 ECH