Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02018 ATGGAGAAGATGGAACATTTCAGCCATATCCACCCTCTTCTGTTAAAGCAAGAAAAGATAGATAACAACAACCTAGTCCTTTGCTCAGGTTGTGAAAACCCAATTTCAGGTCCTGTCTTCAGCTGCGACAAATGCAACTATATACTTCACAAAACATGCGCAGAAATGGCACGCCATGTCAAACACCCATTTCACCCTCAACACCCCCTTGTTCTCCTTTCCACTTCCCCTTACGAGGGACGTTACATATGTGATTCCTGTAGAGGCCTCTTCCGAAACTTCGTGTACCATTGTTATATCTGCAGCTATGACCTTGACGTCTCATGTGCTTCTCAGTGCAACCCGGATGATGGCCATAAGCACGAGTTCATGTCAGTGACAAATCCAAAATCGTTTGTTTGTTATGCTTGTGGCTTGCAAGGAAACGAGGGTCTCGCTTGCCTATGCACCATTTGTCAGATTTGGGTTCATTCTAGCTGTGCTGAATTGCCTCTTGCTGTTAGAATAAAAAGCCATGACCACCCTTTGAAGCTCACTTATGACCTTCATCACATTTATGGTTTCTGGGGTAGCATAACTTGCGGTGTTTGTAATGGAGCAATGAGTGCAGCTTTTGCGGGTTACTTTTGTTCAACGTGCAGATTTCCCGTGCATTTGAAGTGTCTACAAGAAGATTTAAGAGATGAGTGGGAGGCCGCAGCAGAGGATGAGAAATCATCCACGTACTATGAAACTGATGAATCCTTGGATATTGATTTTACTTATAGTTTCTTTGGTCATGAACATTTGTTGAAGTTGAAGGATGAAGAGAGTGATCTGCGATATTCTGGTAAACTCTGCGATGGGTGTAGCCAACCCATCATGCCACCTTTATTTTCTTGTGAAGAAGAAAATTGTGGCTTCATTTTGCACCAAAGTTGTGTTGAATTACCAAGAACAACGCTGCACCCATTTCATGCACACCCTCTAACTCTTCTCCCCAAGGCACCAAACTATGATGGCATTTATAGGTGCGATGGATGCAAAAGATTGAGCAATGGTTTTGTGTATCGTTGTGATGTGTGTCAATTCGACCTTGATGTATGTTGTGGTTCTCTTCAAGAGAGAATTGAACATGAAAGTCACGTGCATCCCTTGCTCCTCAAGAAGACGACCGTTGCTAGGCAATGCAAAGGTTGTCATCGTTGGTCGAAGCATGTGTTTGTGTGTGAAGTTTGTGAGGATTTTGCCATTGATTGTGGATGTGCTACTCTACCGCGTGGAGCATGGTGTATGTACGACAAGCATCCTCTAAGTCTAAACTATTTTGCTGAAGGTTTGAGGGAATATGAATGTGGTATTTGCAATGAAAAAACTTGTCCGAAGCAATGGTTTTATTACTGCGATGACTGTGATTATGGTGCTCATCCTTATTGTGTTGAAGGCAAGTCTAGGCTTGTCAAGTTCGGAGGCAGTTTCCAATATGATGTTCACTCACACCCTCTTGCTTTGGTTGAAGAAATTGATCAAAACACTAAATGTGAAGCATGTGGTGAATGCTGCAATGGCTGGACACTTGAATGTGGGCAATGCAAAATCTACTTTCACCGTGAAGGACAGTGTTTTTGGAAACAATTTAAGAAGAGCGCCAAGTATTTGGAGTTGTCAGGAATTACGAGACACAGGTATGCAGCAAACGTGTTAACCTCCACGCCCAATATATAA 1704 0.4284 MEKMEHFSHIHPLLLKQEKIDNNNLVLCSGCENPISGPVFSCDKCNYILHKTCAEMARHVKHPFHPQHPLVLLSTSPYEGRYICDSCRGLFRNFVYHCYICSYDLDVSCASQCNPDDGHKHEFMSVTNPKSFVCYACGLQGNEGLACLCTICQIWVHSSCAELPLAVRIKSHDHPLKLTYDLHHIYGFWGSITCGVCNGAMSAAFAGYFCSTCRFPVHLKCLQEDLRDEWEAAAEDEKSSTYYETDESLDIDFTYSFFGHEHLLKLKDEESDLRYSGKLCDGCSQPIMPPLFSCEEENCGFILHQSCVELPRTTLHPFHAHPLTLLPKAPNYDGIYRCDGCKRLSNGFVYRCDVCQFDLDVCCGSLQERIEHESHVHPLLLKKTTVARQCKGCHRWSKHVFVCEVCEDFAIDCGCATLPRGAWCMYDKHPLSLNYFAEGLREYECGICNEKTCPKQWFYYCDDCDYGAHPYCVEGKSRLVKFGGSFQYDVHSHPLALVEEIDQNTKCEACGECCNGWTLECGQCKIYFHREGQCFWKQFKKSAKYLELSGITRHRYAANVLTSTPNI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02018 567 SUPERFAMILY Cysteine-rich domain 292 377 IPR046349 -
Vian2g02018 567 SMART PHD_3 27 88 IPR001965 -
Vian2g02018 567 SMART PHD_3 444 511 IPR001965 -
Vian2g02018 567 SMART PHD_3 279 342 IPR001965 -
Vian2g02018 567 SMART PHD_3 133 184 IPR001965 -
Vian2g02018 567 SMART PHD_3 193 263 IPR001965 -
Vian2g02018 567 SUPERFAMILY Cysteine-rich domain 145 222 IPR046349 -
Vian2g02018 567 SUPERFAMILY Cysteine-rich domain 395 479 IPR046349 -
Vian2g02018 567 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 3 73 - -
Vian2g02018 567 Pfam C1 domain 317 363 IPR004146 -
Vian2g02018 567 Pfam C1 domain 428 473 IPR004146 -
Vian2g02018 567 Pfam C1 domain 259 308 IPR004146 -
Vian2g02018 567 Pfam C1 domain 170 221 IPR004146 -
Vian2g02018 567 Pfam C1 domain 7 54 IPR004146 -
Vian2g02018 567 Pfam C1 domain 63 110 IPR004146 -
Vian2g02018 567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 90 IPR013083 -
Vian2g02018 567 SUPERFAMILY Cysteine-rich domain 31 111 IPR046349 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02018 - - vun:114181199 1167.91