Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02015 ATGAGCAGCGCCATCTTCAAAGCTTCAACCAGCAATAATCTTCATTCCTCTCTCAGGGCACTCTTCCATTCAACCCCTCCCCTGCAACGTAAACGGCGCAATTTTTGGGACACCAGAGGCAACAATCATAACTCCAGAAGGTTTAGACGGATGCAAGCAAAACATAGAGTAATGAACAGTATCAATGATTATGCAGAAACCCTGTTTCAGAGCTGGAAGCAAGGTATTGATCGGGACGAGCTGCCATCAAGCCAGGACCCCTCATGGTTTCGTAAAAAGCAATATTTTGATGGGGGCTCTGGAAGGTACAGGAATGGCAAACAAGGATCAAATCATCGGTACAGAAGAGATCCTTTGTTTTGTGAAGATGATTTTGATGTGGAAACCATTTTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGAGGAAAATCCTCAGTGGAGGAGGGCTGAACGCTTCTCTAATTTTGGGAGATCATGGAATTGGAGGCATGAAAGCGAAAATGATTATGAATCTTCATCTGAGTCTGATAGTTCTGGTTTAGATTTAACTCCGGATAGATTAGCCCTTGGATTGAGTGCTTCTGGTCCTCTGAAACTTGAGGATGTAAAAAATGCGTACCGGGCCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGCTCTTGCAAGGCTATAGCAGAAGAGAAGTTCAAGCTTTGCAGTGCAGCTTATCAATCTTTATGTGATAAGCTGGCCTTGGATTGA 765 0.4392 MSSAIFKASTSNNLHSSLRALFHSTPPLQRKRRNFWDTRGNNHNSRRFRRMQAKHRVMNSINDYAETLFQSWKQGIDRDELPSSQDPSWFRKKQYFDGGSGRYRNGKQGSNHRYRRDPLFCEDDFDVETIFRSAFGGNRFFYWSFINEENPQWRRAERFSNFGRSWNWRHESENDYESSSESDSSGLDLTPDRLALGLSASGPLKLEDVKNAYRACALKWHPDRHQGSCKAIAEEKFKLCSAAYQSLCDKLALD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02015 254 Gene3D DnaJ domain 195 249 IPR036869 -
Vian2g02015 254 SUPERFAMILY Chaperone J-domain 201 250 IPR036869 -
Vian2g02015 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 9 253 - -
Vian2g02015 254 SMART dnaj_3 190 252 IPR001623 -
Vian2g02015 254 CDD DnaJ 206 249 IPR001623 -
Vian2g02015 254 PRINTS DnaJ domain signature 213 228 IPR001623 -
Vian2g02015 254 PRINTS DnaJ domain signature 232 252 IPR001623 -
Vian2g02015 254 ProSiteProfiles dnaJ domain profile. 191 252 IPR001623 -
Vian2g02015 254 Pfam DnaJ domain 204 250 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02015 Vian-Chr2 39808229 39812341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02015 - - gmx:100807880 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02015 2 39808229 39812341 Vian2g02015 2 39808229 39812341 ECH
Vian2g02015 2 39808229 39812341 Vian3g02534 3 39452258 39454830 PCT