Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02009 ATGCAGGGAGGAAAGAATACAGGAGAATCCATGAAGGAAAAGGCTTCAAACATTGGTGCTTCTGCCAAAGCTGGCATGGAGAAGACCAAGGCCACTCTCCAAGAGAAGGCAGAAAGAATGACAGCACGTGATCCGTTGCAAAAGGAATTAGCAACCCAGAAGAAGGAAACTAAGGTCAACCAGGCTGAGCTGGACAAGCTGGCGGCCCGTGAACATAACGCTGCGGTGAGTGAGCATAACTCGGCGGTGAAACAGGGAGCCACCTACTCCACCACCGGGGAGCATGGTCATCCCACGGGATTCCACCAGATCTCGGCGATGCCAGGTCACGGGACTGGGCAGCCCACGGGCCACGTGACTGAAGGAGTCGTGGGCTCGCATCCCGTTGGGACCAATAGAGGCCTGGGAGGCACAGCTACGGCCCGTAATACCCGTGCAGGTGGAAACCCGAATGATTATGGGTATGGGACTGGAGGTACTTACAGTTAA 489 0.5542 MQGGKNTGESMKEKASNIGASAKAGMEKTKATLQEKAERMTARDPLQKELATQKKETKVNQAELDKLAAREHNAAVSEHNSAVKQGATYSTTGEHGHPTGFHQISAMPGHGTGQPTGHVTEGVVGSHPVGTNRGLGGTATARNTRAGGNPNDYGYGTGGTYS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02009 162 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 10 137 IPR005513 GO:0009793
Vian2g02009 162 MobiDBLite consensus disorder prediction 1 162 - -
Vian2g02009 162 MobiDBLite consensus disorder prediction 78 98 - -
Vian2g02009 162 Coils Coil 23 43 - -
Vian2g02009 162 Pfam Late embryogenesis abundant (LEA) group 1 9 76 IPR005513 GO:0009793
Vian2g02009 162 MobiDBLite consensus disorder prediction 29 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02009 Vian-Chr2 39729398 39730010 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02009 - - gmx:547828 258.455