Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01993 ATGACGGAACCAACGGAGCCATCCACCTCATCTTCATTGGCGAGGGACCCAAGCACTGTGATTCATCCAAGGCGCGAGCCCTTCGAGCACGGTCTCTTGCCAATCCCACGACTCATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTACAGTTATCCTCCAACCACCGAGTCGACTCGGTGGCCATCTCCGACTCACTTCAGATCTCCATTGAGCACGCCAGGCTCGTCCTCGACACCCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTCACCGCCGCGAAGTTCGGAGAAATCGATTCAGTCGGCGTCGACGTGCATGATCTGGTATTGTTTCTCTACATTCAATCCTACAAGAGACTCCTCCCGCGGACGCACAAAGACTCCGCCGCCATCGCCGATGTCTGGCCTTCTACTTCCGCCTTCGATGGCTATTTGTCCGCTCTCTCGCCGCTTCAGCTTGTACGCAGCAACAGTCGGCGGTTTATGCCTTCTCAGGCCGATGAAGAGGCACATCAGTTGTCGTATCTGCAAAAACACTTGGCTAACATAATGTCTCTTTTAGCAGAGCCAGTAGAGGGAGAAGGCGAAGAGTCTCTGGTTTTAACAATGGATAGATTCGAGCATCTTGGGTTTCTATTTCAGTTTGGTGATAAGGGATTGGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCAAACTCAGACCCTGATATGCCTGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAACATAGTGGCTACTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAAAATGGCCCATCTAGTGCCTCTGATCAGGATGTTGCCATGACTGATGCAAGTACTGTGTCAATTAAGGTTTCAACAAGTAATAGAGGTGCTAGTTTCATTGAAGGGATATCTAAATCATCATATACAAAGAATGCATCTGACATAAAAGGTTCTTCAGTGAAGGTTCTTAATTGCCACGAGTCTTCCATCTACATCCTAGCACCAGTGAGATACGCCACTGTCTATGGATGTTCGGATGCAACAATAGTTCTTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAACGTGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTATTTTCTTCTTGGGAGTGAATCAGCAACCACTTATGCTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACTTTTTACTCCCAATTGGAGGAGCATATGAATGAAGTTGGAATTGTTCCTACAGTGAACCGATGGGATGAACCTCTTGCATTGGGCATGGTTGATCCTCATGATTCGTTATCTCATCCAGCAGGTGGCTCTGATGTTCAAGCTGAGTGTGCTACCCAGGTGGACCCTGATCAGTTCACTAGTTTTGTGATTCCGAACTGGCTTGGAGGAGACACCACTGGGTCTGCAGAAGGCAATCCATTCACGCTACCAGATGCTTACAAGGCATCTCAGCATAAAAATCACAAAAATTTAGGGGAGATAAGGCAACTCATAAGGGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAGTTGTCATCTGCACTCCATGTGTACTTCAAGGACTGGTTATATGCTTCTGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1698 0.4688 MTEPTEPSTSSSLARDPSTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLQLSSNHRVDSVAISDSLQISIEHARLVLDTLASILHSDSEPLTAAKFGEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAIADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIMSLLAEPVEGEGEESLVLTMDRFEHLGFLFQFGDKGLEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVATLEYISERTSSKENGPSSASDQDVAMTDASTVSIKVSTSNRGASFIEGISKSSYTKNASDIKGSSVKVLNCHESSIYILAPVRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECIFFLGVNQQPLMLGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWDEPLALGMVDPHDSLSHPAGGSDVQAECATQVDPDQFTSFVIPNWLGGDTTGSAEGNPFTLPDAYKASQHKNHKNLGEIRQLIREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01993 565 ProSiteProfiles C-CAP/cofactor C-like domain profile. 282 435 IPR017901 -
Vian2g01993 565 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Vian2g01993 565 Gene3D - 309 461 IPR016098 -
Vian2g01993 565 PANTHER UNCHARACTERIZED 17 563 IPR039589 -
Vian2g01993 565 SMART carp 337 374 IPR006599 -
Vian2g01993 565 SMART carp 375 409 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01993 Vian-Chr2 39579163 39588156 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01993 K16810 - gmx:100780410 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01993 2 39579163 39588156 Vian2g01993 2 39579163 39588156 ECH