Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01992 ATGACGGAACCAACGGAGCCATGCACGTCTTCTTCGTTGGCGAGGGACTCTAGCACCGTGATTCACCCAAGGCGGGAGCCCTTTGAGCACGGCCTCTTGCCAATCCCACGCCTCATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAGCGGAAGCTTCTAGAGTTATCCTCCAACCATCGAGTAGGCTCGGCGGCCATCTCCGAGGCATTGCAGATTTCCGTTGAGCACGCCAGACTCGTCCTCGATACGCTCGCCTCGATTCTGCCCTCCGACTCCGAACCTCTTGTCGCCGCAAAGCTCGGCGAAGCCGATTCCGTCGGCGTCGACGTGCATGATCTGGTACTTTTTCTCTACATTCAATCCTTCAAGAGGCTCCTCCCGCGGACGCACAAGGACTCTGCTGCCGTCGTCGATGTCTGGCCTTCCACTTCCGCTTTCGATGGCTACTTGTCCGCCCTCTCGCCGCTTCAGCTTGTTCGTAGCAACAGTCGGCGGTTTTTGCCATCTCAGACTGATGAAGAGGCGCATCAATTGTCATATCTGCAAAAACACTTGGCTAACATTCTGTCTCTTCTAGCAGAGCCTGTGGATGGAGAAGGCGAAGAATCTCTGGTTTTAACCATGGATAGTTTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGACAATGGATCTGAAGGAAATTCTTTCAGTCAATTTTCTCCCTTTTTTGCAAATTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCTCAAGTTCATGATTGGCTTCAACAAAACATTGTTGCTGCTTTGGAATATATTTCTGAACGGACTTCTTCTAAGGAAAATGGGCCAGCTTCTCCTTCTGATCACGATGTTGCTATGACTGATGCATCCAGTGCCTCAGTTAATAAGGCCTCAACCAGAGGTGCAAGTTTCATTGAAGGGATTTCAAAATCATCATATATGAAGCATGCACCTGACATTAAAGGTTCTAATGTTAAGGTTCTAAATTGCCACGAGTCTGCCATATACATCTTAGCACCATTGAGATATGCTACTGTCTATGGGTGTTCAGATGCAACAATAGTTCTGGGAGCAGTAGGCAAGGCTGTCAGAGTGGAACATTGTGAAAGAGTTCATGTAATCGTAGCAGCAAAACACATTTGTATTGCTAATTGTCGGGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTGTTGGTGATAACCATAAACTGCAGGTGGCTCCCTATAATACTTTTTATTCCCAATTGGAGGAGCATATGGACGAAGTTGGAATTGTGCCCACAGTTAACCGATGGGATGAGCCTCTAGCATTGGGCATGGTTGATCCGCATGATTCATTGTCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCTGCTATGCGGGTGGACCCAGATCAGTTCACTTATTTTGTGATTCCCAACTGGTTTGGAGGAGAGTCCACTGGGGCTACAAAAGGCAACCCATTCACGTTACCAGATGCTTATATGGCATCTCAGAATAAAAATCAAAAAAATTTAGAGGAGATAAGGCAGCTCTTACGAGAAGCACCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCTCTCCATGTCTACTTCAGGGACTGGTTATATGCTTCCGGAAACATTCGTCAGCTTTATTTTCTACAAGGCGATTAA 1695 0.472 MTEPTEPCTSSSLARDSSTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKRKLLELSSNHRVGSAAISEALQISVEHARLVLDTLASILPSDSEPLVAAKLGEADSVGVDVHDLVLFLYIQSFKRLLPRTHKDSAAVVDVWPSTSAFDGYLSALSPLQLVRSNSRRFLPSQTDEEAHQLSYLQKHLANILSLLAEPVDGEGEESLVLTMDSFEHLGFLIQFGDNGSEGNSFSQFSPFFANSDPDMPAVPVPAAQVHDWLQQNIVAALEYISERTSSKENGPASPSDHDVAMTDASSASVNKASTRGASFIEGISKSSYMKHAPDIKGSNVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKHICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYSQLEEHMDEVGIVPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESAMRVDPDQFTYFVIPNWFGGESTGATKGNPFTLPDAYMASQNKNQKNLEEIRQLLREAPLEESRKRELSSALHVYFRDWLYASGNIRQLYFLQGD 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01992 564 Gene3D - 308 469 IPR016098 -
Vian2g01992 564 MobiDBLite consensus disorder prediction 275 298 - -
Vian2g01992 564 SMART carp 336 373 IPR006599 -
Vian2g01992 564 SMART carp 374 408 IPR006599 -
Vian2g01992 564 Pfam Tubulin binding cofactor C 329 443 IPR012945 -
Vian2g01992 564 Coils Coil 506 527 - -
Vian2g01992 564 ProSiteProfiles C-CAP/cofactor C-like domain profile. 285 434 IPR017901 -
Vian2g01992 564 PANTHER UNCHARACTERIZED 18 562 IPR039589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01992 Vian-Chr2 39566552 39577312 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01992 K16810 - gmx:100819271 1008.05