Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01977 ATGAAAGAAATTGAGAAGAGAAAAGCTTCAAGAAATAGTCAGACAAAGGGTTCAAGAAAAACCGAAAGGAGAGAGAGTAAATTGCAACAAGATAATTCTTCAAAAAAATTGAGTGAAAAAGGAATTGAATCTAAGACACTCCATGATAGTAGACCAACTGCAAATAATACTATAAGTGATTCCAACACGGCCTCAGAGAATTCAGAAACTTATGAAAATGTGGTTATACATTACCTGGACGATGTCAACAGGTCTGAGGAGGCACTTGCCAAGATCAAAGTTAATGAAATGGTTGCTAGTGAAAACAAAAATGAAGTGGCTGATGATCATTCTACTGATTTGGAGAAAGAGCAAAAGGAAGGCAATGACGAAGTATCAGATGCTGAGACAGTAAAGGATTCAGTATCTTCCCAAGGTGATTCTTTGACAACTGAGGATGAGAGAACTGAAGTGGCTTCAAAAGATCCTAAAGGTAAGGTTAGAGTTAATCCTCCAGAAAACAACCGTGTTTCAAAGGAGAGATCTGATAAAAAAGAAAATAAATTGCAATCAAAGGTATCACATGGCAATCAAAAGAAACCTATGAACCCAAATAAAGGGCCCTCCAGAGTTGCAGACAAAAATATTTCCTCAACCAATTCTAAGACTTTGAAAGTTCCTGTAAATGCTTTGTCAGAATCTTCTGAAGGTGTTGATGAAAAACCTGTTCAAGAGATCAAGGAACTTGATATTGTGGATGGATCCCCCAATGGTGCTCAGAGCATAGGAATTGAATATGAAAGTCATGAAACGGTTAATGCTGAAAAAAATGATGAACATGAGGATGAGGCAGCTGTGGAATTAAAAATTGACGAAATGCAATTACGAATTGAAAAGCTTGAAGAGGAACTTAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCAGGACACAAGGTGCACACACCAGCTCGACGCCTTTCTAGGCTCTATATACATGCTTGTAAGCATTGGACCCAAAAAAGGAGAGCCACAATTGCCAAGAATACTGTTTCTGGCCTCATTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATACCGTTGTACTGAGAGAGATAATTTCACAAGCTTTTGGGAATTCATGTCAAGCTAGTCCCTTTAAAAGGTTGGCTGAGTCAAATGGGACTGGCAAGAGAAATGATGGGAAGTATACTGCACTGAAACGGAAGAGTAGCTCCAATGGTAAACCAGGAAGTGGTTTTATGCCTCTCGTTGAAGATTGGCAAGAGACAGGAACCTTTACCTTTGCTTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTATATGCAGTCTCCAGATGGGGATTCTTCAAATAAATCTATTGGGAAGCTGATGGGACCTGCTCTGGGTGATCAAAATCAAGGAAATTTTTCCATCAATCTTTGGAGAAATGCTTTCCAAGATGCCTTTCAACGACTCTGTCCTGTTCGAGCAGGAGGACATGAGTGTGGTTGTTTGCCCGTATTGGCTAGAATGGTCATGGAACAATGCATAGCTAGACTAGACATTGCTATGTTCAATGCTATTCTTCGGGAGTCGGCCCTTGAGATCCCAACTGATCCTATATCAGACCCTATTGTGGATTCAAAGGTTTTGCCAATTCCAGCTGGGGATTTAAGCTTTGGTTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGTTGAAGATTGTGTACAAGAAGATCAGGAGGAGAAGGGTGAGAATGATGAAAAGCAGGGTGGGGCTGGTGAACCTAAGTCTTTTGTTCTCCTAAACGACTTGAGTGACCTTCTGATGCTGCCTAAAGACATGCTTATAGATAGAAAAATCAGACAGGAGGTGTGTCCTTCCATCAGTCTGTCATTGGTTATACGGATTCTCTGTAACTTCACTCCTGATGAATTCTGTCCAGACTTTGTTCCAGGAACTGTATTGGAGGCCCTGAACGCAGAGACTATTATAGAGCGAAGATTGTCATCAGAAGCTGGAAGAAGCTTCCCCTATGTAGCTGCTCCTGTTCTGTACAAGCCTCCCTCCTCTGGTAATGTGGCAGAGAAAGTTGCAGAGGCTGGAGGAAAGTCTCACTTGGGAAGAAATGTATCAGATGTTAAGAGAAGAGGATACACCAGTGATGAAGAGCTAGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTCATCTCCATCAGTCACTCATAATGGTAAAGGTAGTCACAAAGAACAAGGGGGCCACCCCACCACAAATTCTAGATACCAACTCTTACGTGAAGTTTGGTCCATGTGA 2436 0.4134 MKEIEKRKASRNSQTKGSRKTERRESKLQQDNSSKKLSEKGIESKTLHDSRPTANNTISDSNTASENSETYENVVIHYLDDVNRSEEALAKIKVNEMVASENKNEVADDHSTDLEKEQKEGNDEVSDAETVKDSVSSQGDSLTTEDERTEVASKDPKGKVRVNPPENNRVSKERSDKKENKLQSKVSHGNQKKPMNPNKGPSRVADKNISSTNSKTLKVPVNALSESSEGVDEKPVQEIKELDIVDGSPNGAQSIGIEYESHETVNAEKNDEHEDEAAVELKIDEMQLRIEKLEEELREVAALEVSLYSIVPEHGSSGHKVHTPARRLSRLYIHACKHWTQKRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTVVLREIISQAFGNSCQASPFKRLAESNGTGKRNDGKYTALKRKSSSNGKPGSGFMPLVEDWQETGTFTFALERVESWIFSRIVESVWWQALTPYMQSPDGDSSNKSIGKLMGPALGDQNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEQCIARLDIAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDCVQEDQEEKGENDEKQGGAGEPKSFVLLNDLSDLLMLPKDMLIDRKIRQEVCPSISLSLVIRILCNFTPDEFCPDFVPGTVLEALNAETIIERRLSSEAGRSFPYVAAPVLYKPPSSGNVAEKVAEAGGKSHLGRNVSDVKRRGYTSDEELEELDSPLTSIIDKLPSSPSVTHNGKGSHKEQGGHPTTNSRYQLLREVWSM 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01977 811 MobiDBLite consensus disorder prediction 1 69 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 143 186 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 400 429 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 1 47 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 187 214 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 102 130 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 96 214 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 774 802 - -
Vian2g01977 811 MobiDBLite consensus disorder prediction 48 69 - -
Vian2g01977 811 Coils Coil 276 303 - -
Vian2g01977 811 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 238 809 IPR021827 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01977 Vian-Chr2 39345433 39348728 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01977 - - pvu:PHAVU_001G137700g 1399.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01977 2 39345433 39348728 Vian2g01977 2 39345433 39348728 ECH