Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01968 ATGGCTATTGCTGCAGCAGCTGTCGTCGTGCCATTGGGTCTCCTCTTCTTCGCTTCCGGCCTCCTTGTTAATCTCATTCAGGCGATATGCTATGTTGTATTAAGGCCGGTGTCAAAGAATTTGTACCGACGGATCAACCGGGTTGTAGCGGAATTGTTGTGGCTGGAGCTTGTATGGCTTATTGACTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATCATGAAACCTTTCGTTTAATGGGTAAAGAGCATGCGCTTGTGATAAGCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGCCTTGGCAGCACTCTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAAGATGAAAGCACATTAAAGTTAGGCATCCAACGACTGAGTGATTATCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAATACGCAACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTAATTCCAAGAACTAAGGGTTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCTGCTATTTATGATGTAACAGTAGCTGTCCCAAAGAATTCCCCCGCTCCTACAATGCTAAGGCTCTTCAAAGGGAAACCTTCAGTGGTGCATGTTCACATCAAGCGGCATTTAATGAAGGAAATGCCAGAAACAGATGAGGCCGTTGCTCAATGGTGTCGAGATATATTTGTGGCCAAGGATGCTCTATTAGACAAACATATGGCCGAGGATACGTTTAGTGACAAAGAGCTGCAGGATGCTGGTCGACCAATAAAGTCTCTTCTGGTAGTGATATCTTGGGCCTGTCTAATTGTTGCGGGGTTTCTAAAGTTCTTACAACGGTCTTCGCTACTATCTTCATGGAAGGGTGTTGCATTCTCAGCTTTTGGTTTGGCAGTGGTTACTGCACTTATGCAAATTTTGATTCAATTCTCGCAGTCAGAGCGTTCAAACCCAACTAAGATCGCCCCTGTTCAGTCAAAAAACAAGGGGGAACAACTAGAGGCTAGGAATGACAAGCAACAGTAG 1164 0.4476 MAIAAAAVVVPLGLLFFASGLLVNLIQAICYVVLRPVSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQIFTDHETFRLMGKEHALVISNHRSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKLGIQRLSDYPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAVPKNSPAPTMLRLFKGKPSVVHVHIKRHLMKEMPETDEAVAQWCRDIFVAKDALLDKHMAEDTFSDKELQDAGRPIKSLLVVISWACLIVAGFLKFLQRSSLLSSWKGVAFSAFGLAVVTALMQILIQFSQSERSNPTKIAPVQSKNKGEQLEARNDKQQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01968 387 CDD LPLAT_LCLAT1-like 62 253 - -
Vian2g01968 387 MobiDBLite consensus disorder prediction 364 387 - -
Vian2g01968 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Vian2g01968 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 9 359 - -
Vian2g01968 387 SMART plsc_2 86 208 IPR002123 GO:0016746
Vian2g01968 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 37 283 - -
Vian2g01968 387 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01968 Vian-Chr2 39212824 39221523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01968 3 385 Miscellaneous Gene Families AT3G57650 72.680 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01968 K13523 - gmx:100792858 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01968 2 39212824 39221523 Vian2g01968 2 39212824 39221523 ECH