Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01965 ATGGCTGCAACTCTTCCGACTAAACCAATTCGTGTGCCATTCACGAAATGGTCATTTTCAATGAATCCGGGGCCATTCACTTTGAAGGAGCATGTGCTTATCACCATCTTTGCTACATCTGGATCTAATGGTGTTGATGCAATCAGCATCATCACAATCGTTAAGGCTTTCTATCACAGGAGCATCCACCCAGTAGCAGCTTATTTGTTAGTAATGTCAACCCAAATGCTTGGATATGGATGGGCTGGGATTTTTAGAAGATTCCTAGTGGACTCCCCTTTTATGTGGTGGCCTGAAAACCTTGTGCAGGTGTCTCTATTCAAGGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGAAAATACACTAGGATGCAATTCTTTTTCCTAGTCTTTGTAGCGAGCTTTGCCTATTACACTCTTCCAGGGTACCTTTTCCAAGCAATATCAACCATCTCGGTTGTTTGCCTGATTTGGAATGATTCCATCACAGCCCAACAAATTGGCTCAGGCATGAATGGAATTGGCATAGGCTCATTTGGCCTCGATTGGAACAATGTTGCAGCCTTCTTAGGTAGTCCTTTAGCTGTACCTGGCTTTGCCATCGTCAACATGTTGATAGGATTTATGTTGGATATGTATGTTCTAGTTCCCCTTGCCTATTGGAGCAATTTATATGATGCCAAAAAGTTCCCCCTCATTAGTTCTCACACGTTTGATTCAACTGGTGCAACATATAATGTTACTCGGGTTCTAAATCCCAGAACTTTTGACATTGATTTGGATAGTTATAACAATTACAGCAAGATCTATCTTAGTATAACATTTGCCTTTGAGTATGGATTAAGCTTTGCAACTTTGACTGCCACTATTTCCCACGTAGTCCTCTTTCATGGAGAAATTATTCTTCAGACGTGGAGGAAGACAACAAGAGCACCAAAAGAACAACTTGGAGATGTCCATACAAGAATTATGAAGAGAAACTATGAACAAGTCCCTGAATGGTGGTTTGCCACCATATTGATCCTTATGGTTGTTGTGGCCTTGGTTGCTTGTGAGAGCTTTGGAAAGCAACTCCAACTGCCATGGTGGGGAATTTTACTTTCTCTAACAATTGCATTAGTGTTCACCTTGCCAATTGGGGTTATTGTAGCTACAACAAACATAAAAACAGGACTCAACGTGATTTCAGAGTTAATAATTGGATTCATTTACCCAGGAAAACCCCTTGCTAATGTAGTCTTTAAGATTTATGGACATGACAGCATGGTACAGGCAGTTTCGTTTCTTAGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCTAAATCTATGTTCATCGTTCAGCTTGTAGGCACAGTTGTTGCTTCAACTGTCTACTTTGCCACATCTTGGTGGCTTCTGACGTCTATTGAAAACATTTGTGATGAAGCATTGTTGCCAAAGGGTAGTCCATGGACATGCCCTGGTGACGATGTGTTCTATAATGCTTCAATCATATGGGGAGTTGTAGGACCACAGAGAATGTTTGCCAAGGACGGTGTTTATCCTGGGATGAATTGGTTTTTCCTCATTGGTCTACTTGCTCCTATTCCAGTGTGGTTGCTTTCTCGTAAATTCCCCAACCACAAGTGGATTGAACTCATCAACTTTCCCATTATCGCTGCAGGAGCATCCAACATTCCACCAGCCAGATCAGTGAATTATATTACATGGGGCATTGTTGGAATCTTCTTCAATTTCTATGTTTATAGAAAGTTTAAGGCATGGTGGGTCCGGCATACTTACATCCTTTCAGCTGCTTTAGATGCTGGAGTTGCTTTCATGAGTGTGATCCTTTATTTCACCCTTCAATCTAATGGTATTTTTGGTCCAGTCTGGTGGGGTCTTGATGCAGACCACTGCCCTTTGGCCAAATGCCCTACAGCTCCAGGTGTATATGCCGAGGGATGCCCTCTTCTTTGA 1965 0.4178 MAATLPTKPIRVPFTKWSFSMNPGPFTLKEHVLITIFATSGSNGVDAISIITIVKAFYHRSIHPVAAYLLVMSTQMLGYGWAGIFRRFLVDSPFMWWPENLVQVSLFKAFHEKEKRPKGKYTRMQFFFLVFVASFAYYTLPGYLFQAISTISVVCLIWNDSITAQQIGSGMNGIGIGSFGLDWNNVAAFLGSPLAVPGFAIVNMLIGFMLDMYVLVPLAYWSNLYDAKKFPLISSHTFDSTGATYNVTRVLNPRTFDIDLDSYNNYSKIYLSITFAFEYGLSFATLTATISHVVLFHGEIILQTWRKTTRAPKEQLGDVHTRIMKRNYEQVPEWWFATILILMVVVALVACESFGKQLQLPWWGILLSLTIALVFTLPIGVIVATTNIKTGLNVISELIIGFIYPGKPLANVVFKIYGHDSMVQAVSFLSDFKLGHYMKIPPKSMFIVQLVGTVVASTVYFATSWWLLTSIENICDEALLPKGSPWTCPGDDVFYNASIIWGVVGPQRMFAKDGVYPGMNWFFLIGLLAPIPVWLLSRKFPNHKWIELINFPIIAAGASNIPPARSVNYITWGIVGIFFNFYVYRKFKAWWVRHTYILSAALDAGVAFMSVILYFTLQSNGIFGPVWWGLDADHCPLAKCPTAPGVYAEGCPLL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01965 654 NCBIfam OPT family oligopeptide transporter 1 618 IPR004813 GO:0035673
Vian2g01965 654 PANTHER ISP4 LIKE PROTEIN 1 652 IPR004648 GO:0055085
Vian2g01965 654 Pfam OPT oligopeptide transporter protein 13 616 IPR004813 GO:0035673
Vian2g01965 654 NCBIfam small oligopeptide transporter, OPT family 3 619 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01965 Vian-Chr2 39173931 39175895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01965 1 654 Organic Solute Cotransporters AT4G26590 64.885 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01965 - - gmx:100820498 1217.99