Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01943 ATGATCTTCACACGGGGAATTCAGAAATCGGCTCACCATATGGACTGCAAAGGAAATGTTAGGACGATTAACAATAAGCTTCAGAAACATCTCAGTGATGAAGATCATCCCTATCACAAATTTAGCACAGGGAACTGGGACACTTTGGAAGTTAAACCTAAAGCAAGAGGATTAGACACAAGGGAGGAGCTTCTCAAGTTTTATGATGAAAACTATTCTGCTAATTTAATGCATCTAGTTATATACACAAATGAAAGCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTAGAAACACCAACAAAAGTTGTTTCCATCCTTGTGGTCAGCCATGCAAATCAGAACATTTGCAGATTGTTGTCAGGGCTGTCCCAATAAAGCAAGGTCATAAATTGAGAATTGCATGGCCAGTAACCCCTGAAATTCATCATTACACTGAAGGGCCAAGCAGGTATCTCGGCCATCTCATTGGTCATGAAGGAGAAGGGTCTTTATATTACATCTTAAAAAAATTGGGGTGGGCTACAAGCTTGTCTGCAGGTGAATCAGATTGGAGTTTGGATTTCGCATTCTTTTCAGTTGTAATTGATCTTACTGATTCTGGTCATGAGCACGTAGAAGATATCATTGGGTTGTTGTTCAAATACATCGAGCTTCTACAACACTCTGGTGTTTGCGAATGGATTTTTCAAGAGCTTTCAGCAATTTGTGAGACCAAGTTCCATTATCAGGACAAAATTCCTCCCAGTGATTATGTTGTTGATATTGCATCAAATATGCAGTTTTATCCTGTGAAAGATTGGTTGACAGGATCATCCTTGCCTTTTAAGTTTAGCCCAAATGTTATCCATATGATACTAGGTCAGCTTTCTGCAGACAACGTTCGAATCTTTTGGGTGTCCAAAAATTTTGAAGGGCATACTGATAAGGTGGAGCCATGGTATGGAACTGGGTATTCCCTTGAAAAGATCACTGGCTCTGTTATTCAGGGGTGGATGGCTTCTGCTCCTAATGAAAACTTGCATCTTCCAGCTCCTAACAACTTCATTCCAACTGACTTGTCACTTAAAGTTGTGCAAGAAAAGGTGAAGTTCCCAGTTTTGTTAAGGAGGTCAACTTATTCAGCCTTATGGTACAAGCCAGACACATTGTTTTCTACACCCAAGGCTTACGTTAAGATTGATTTCAATTGCCCATATGCTGGAAGCTCTCCTGAGGCTGAGGTTTTGGTGCATATTTTCACACAATTATTGATGGATTACTTGAATGACTATGCTTATTATGCTCAGGTTGCTGGTCTATATTATAGCATAACTCACACAGATGGTGGTTTCCAGGTGACACTCCTTGGTTATAATCACAAGTTAAGGATATTACTCGAAACAATAGTTGAAAAGATTTCAACATTTGAAGTGAAAACTGACAGGTTTTCTGTCATCAAGGAAATGGTAACCAAGGAATATCAAAATATGAAGTACCAACAACCTTATCAGCAGGCTATGAACTACTGCTCTTTGATCTTACAAGATCATACCTGGCCTTGGATAGAACAACTCGACTTGCTTCCTGCTCTTCAAGTTGAAGATGTTGCTAAATTCGTACCATTAATGCTCTCCAGGACATTTTTAGAGTTCTATATAGCAGGGAACATTGAAAGCCATGAAGCAGAGTCAATGGTCAAGCACGTAGAAAATGTTCTCTTTAATTATTCAAAACCTCTGTGCAAACCTTTATTCTCATCTCAACATTTGGTGAATCGGGTTGTTAAACTTAAAAGTGGCATGAATTACTTCTACCCTTCAGAATGTCTTAATCCTGAAAATGAGAATTCTGCTCTTCTGCACTATATACAGGTTGGTCGTGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCTCTTGTTGCAAAGCAACCAACCTTTCATCAGCTAAGATCGGTTGAACAGCTGGGGTACATTACTGTGCTCTTGCAGAGGAATGATTGTGGTATACGTGGACTACAGTTTATTATCCAATCCACAGAAAAGTCTCCCGGGAACATTGAGCAAAGGGTCGAGGCATTTCTCAAAATGTTTGAGACCAAGATTTATGAGATGACAATTGATGAGTTCAAGAGTAATGTAAATGCTTTGATAGATGTGAAGCTAGAGAAACACAAAAATTTGAGGGAAGAATCATCATTTTTCTGGCGGGAGATTAACGATGGTACTTTGAGGTTTGATAGGAGAGACCATGAGGTTGAAGCATTAAGGCAGCTCACTCTTCAAGAATTGATAGATTTCTTCAATGAATATGTGAAAGTTGGTGCAGCTCGAAAGAAAACATTAAGTGTACGAGTTCATGGGAACCGGCATTCATCTGAGTACAAAGCCGAAGTCTCAGACCCACACTTGGCTAGAATAGATAATATATTTACATTTAGAAGATCACAGTCTCTTTATGGTTCATTTAAAGGACTTTCTGGGCAGATGAAATTATAG 2496 0.3886 MIFTRGIQKSAHHMDCKGNVRTINNKLQKHLSDEDHPYHKFSTGNWDTLEVKPKARGLDTREELLKFYDENYSANLMHLVIYTNESLDKIQNLVEEKFQDIRNTNKSCFHPCGQPCKSEHLQIVVRAVPIKQGHKLRIAWPVTPEIHHYTEGPSRYLGHLIGHEGEGSLYYILKKLGWATSLSAGESDWSLDFAFFSVVIDLTDSGHEHVEDIIGLLFKYIELLQHSGVCEWIFQELSAICETKFHYQDKIPPSDYVVDIASNMQFYPVKDWLTGSSLPFKFSPNVIHMILGQLSADNVRIFWVSKNFEGHTDKVEPWYGTGYSLEKITGSVIQGWMASAPNENLHLPAPNNFIPTDLSLKVVQEKVKFPVLLRRSTYSALWYKPDTLFSTPKAYVKIDFNCPYAGSSPEAEVLVHIFTQLLMDYLNDYAYYAQVAGLYYSITHTDGGFQVTLLGYNHKLRILLETIVEKISTFEVKTDRFSVIKEMVTKEYQNMKYQQPYQQAMNYCSLILQDHTWPWIEQLDLLPALQVEDVAKFVPLMLSRTFLEFYIAGNIESHEAESMVKHVENVLFNYSKPLCKPLFSSQHLVNRVVKLKSGMNYFYPSECLNPENENSALLHYIQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLLQRNDCGIRGLQFIIQSTEKSPGNIEQRVEAFLKMFETKIYEMTIDEFKSNVNALIDVKLEKHKNLREESSFFWREINDGTLRFDRRDHEVEALRQLTLQELIDFFNEYVKVGAARKKTLSVRVHGNRHSSEYKAEVSDPHLARIDNIFTFRRSQSLYGSFKGLSGQMKL 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01943 831 Gene3D - 112 337 - -
Vian2g01943 831 Gene3D - 593 826 - -
Vian2g01943 831 PANTHER NARDILYSIN 23 815 - -
Vian2g01943 831 SUPERFAMILY LuxS/MPP-like metallohydrolase 351 576 IPR011249 GO:0046872
Vian2g01943 831 FunFam Insulin-degrading enzyme-like 1 peroxisomal 593 825 - -
Vian2g01943 831 FunFam nardilysin isoform X1 111 337 - -
Vian2g01943 831 Gene3D - 366 592 - -
Vian2g01943 831 Pfam Peptidase M16 inactive domain 60 236 IPR007863 -
Vian2g01943 831 Pfam Peptidase M16 inactive domain 529 716 IPR007863 -
Vian2g01943 831 Gene3D - 6 106 - -
Vian2g01943 831 Pfam Middle or third domain of peptidase_M16 245 523 IPR032632 -
Vian2g01943 831 SUPERFAMILY LuxS/MPP-like metallohydrolase 114 350 IPR011249 GO:0046872
Vian2g01943 831 SUPERFAMILY LuxS/MPP-like metallohydrolase 22 106 IPR011249 GO:0046872
Vian2g01943 831 FunFam Insulin-degrading enzyme 366 592 - -
Vian2g01943 831 SUPERFAMILY LuxS/MPP-like metallohydrolase 592 819 IPR011249 GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01943 K01408 - gmx:100804856 1491.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01943 2 38835792 38854853 Vian2g01943 2 38835792 38854853 ECH