Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01938 ATGGCAGGAGAAGATTGGGAAGGTGGAGGAAAAAATGGTGGTGGTGACGAAGACGCAACATCTAATCAACCAATTAAATCCGAAGAAACCGATTCAACAAACCCTACCAATGTCTGCATCAAGTGCAAGCTCAACGACGCTGTTTCCGGCTACGGCGGAATCGACGACGGCCGTTTCTGCGCCGATTGCTTCAAAACCAACTTATTCGGAAAGTTTCGTTTCGCTGTCACTTCAAACGCCATGATCACGCCCACTGATAAGGTTCTCGTTGCCTTCTCAGGTGGCCCTTCTTCCAGGGTAGCTTTGCAATTTGTGCATGACATGCAAGAGAGGGCTCAGAGGAACTTTGATGCGAGTAGGGATAGGTCTTTGCCGGTCTTTGGTGTTGGAGTTGTGTTTCTTGATGAGAGTGCCGTCTTATCTATTCCTTCCAGTGAAATGGAGGAAACTGTTGAAGTTATTAGAGAGGTTGTGTCTTGTTTAGCGTCGCCGTGGAAGGAGTTGCATATTGTTCCCATTGAGACGGTTTACTCGTCGGATTCTGGTGATGGGAAGGAGAGGCTAATTAAGGTAATGAACACGGTCACTGATCCGACGGGAAGGGAGGATATGTTGCTCTGTATGCGAATGTTGGCGCTGCAAAAAGTTGCTTCAGAATGTGGGTATAACAGGATCGTTCTGGGATCATGCATTTCTAGGATTGCTTGCCATGTCATTTCAGCCGCCGTGAAGGGTCAAGGATACTCATTGCCTGCAGATATACAATATGTTGATGCTAGATCGGAAGTTCCTGTTGTACTTCCTCTGCGTGACTGTTTTGCCCAAGAGATCAACATGCTTTGCCACCTTGATGGTCTAAAGACTGTGAAGTTGTCTACAGGTCCGTGCTCTAGCATTAATCGCTTGGTATCATCTTTTGTGTCTTTATTGCAGGAAGAAAACCCATCTCGAGAGAGTACAATTGTAAGAACAGCCGGTAAACTCACTCCTTTTCAATTCAATAGGATTCCAGAGATCATTGATGGAAATGTTCCTTTGGCGACTCGAAGACGACAGAAGAGATATAATCTCAAATCAAATGAGTCTGTTTCCTCTGAATCTTTCTGTCCTCTCTGCAACAGCCCACTCAACAAGAGTGAGATTGTTGATTGGAGCAATATGGATAGCCACAGAAATAGTGACAGTTTTTACAATACCTGCTGTTCAAGTTGTCAGTTTCAGATTCTTCCAAGTGATTCAACATCAATCGAACAATTTTATATGGATTTACCTCAACCAATGGTTAGCCGAGCAAAGCAAGCTAGCCATGGTAATTTGAGTCTGCTAAGGGAGCAAATACAAGATTTTCTGCTTTCTGATGGTGAAGATGAAAAATAA 1377 0.443 MAGEDWEGGGKNGGGDEDATSNQPIKSEETDSTNPTNVCIKCKLNDAVSGYGGIDDGRFCADCFKTNLFGKFRFAVTSNAMITPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDASRDRSLPVFGVGVVFLDESAVLSIPSSEMEETVEVIREVVSCLASPWKELHIVPIETVYSSDSGDGKERLIKVMNTVTDPTGREDMLLCMRMLALQKVASECGYNRIVLGSCISRIACHVISAAVKGQGYSLPADIQYVDARSEVPVVLPLRDCFAQEINMLCHLDGLKTVKLSTGPCSSINRLVSSFVSLLQEENPSRESTIVRTAGKLTPFQFNRIPEIIDGNVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLNKSEIVDWSNMDSHRNSDSFYNTCCSSCQFQILPSDSTSIEQFYMDLPQPMVSRAKQASHGNLSLLREQIQDFLLSDGEDEK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01938 458 Hamap Cytoplasmic tRNA 2-thiolation protein 2 [CTU2]. 33 412 IPR019407 GO:0000049|GO:0002098|GO:0034227
Vian2g01938 458 Gene3D HUPs 38 401 IPR014729 -
Vian2g01938 458 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 302 - -
Vian2g01938 458 MobiDBLite consensus disorder prediction 16 34 - -
Vian2g01938 458 Pfam Cytoplasmic tRNA 2-thiolation protein 2 298 386 IPR019407 GO:0000049|GO:0002098|GO:0034227
Vian2g01938 458 MobiDBLite consensus disorder prediction 1 34 - -
Vian2g01938 458 FunFam Cytoplasmic tRNA 2-thiolation protein 2 38 404 - -
Vian2g01938 458 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 33 448 IPR019407 GO:0000049|GO:0002098|GO:0034227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01938 K14169 - gmx:100804325 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01938 2 38765976 38772153 Vian2g01938 2 38765976 38772153 ECH