Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01910 ATGAGCACACATGGTTCTTACAGCATGAGATCCAAAGCCTCCTTTGAAAATGAAGCCAAGGCCACGGTGAAAGAAAGTGGGGGAGGAGGGAGTGGAGGGAAGAGCGGGAAGACAATGTCCTCCAACAGCAAGGAGAATCTGTTCATATGTTTTCTGGTGACACTTTGGTACTCTTCAAACATTGGTGTGATCCTTCTCAACAAGTACCTGCTTTCAAACTATGGGTTCAAGTTCCCCATCTTCCTCACAATGTGCCACATGTCAGCCTGTGCTGTTTTCAGCTATATCTCCATTGTGTTCTTCAAGGTGGTGCCTCAGCAGATGATCAAATCGAGGTCCCAGTTCATGAAGATTGCAACTTTGAGTCTTGTCTTCTGTGCCTCTGTGGTGGGTGGCAACATATCCCTCAGGTACCTCGCCGTGTCCTTCAACCAGGCGGTCGGGGCAACCACACCCTTTTTCACTGCTGTCTTTGCCTATTTGGCTACCCTTAAGAGAGAGGCTTGGGTTACGTATGCTGCCCTTGTTCCTGTTGTTGCTGGGGTTGTCATTGCAAGTGGGGGTGAGCCAGGGTTTCACTTATTTGGATTCGTTATGTGCCTAAGTGCTACCGCTGCAAGAGCTTTCAAGTCTGTCCTTCAGGGCCTTTTACTTTCTTCTGAAGGGGAAAAGTTGAACTCGATGAATTTGCTCCTGTACATGTCTCCAATCGCAATCCTAGTTTTGTTACCTGCAGCTCTTATCATGGAACCCAATGTGGTAGATGTCACACTGACGCTTACAAAGGACCATAAATCTATGTGGCTTCTTCTTTTTCTTAACTCTACCACAGCATATGCAGCAAACTTAACAAACTTCTTGGTGACTAAACATACTAGTGCTCTCACACTCCAGGTGTTAGGCAATGCAAAAGGTGCAGTGGCTGTTGTAATCTCCATACTTCTATTCAGAAACCCTGTGACTATTGTGGGCATGGGTGGATACACAATTACTGTGATGGGAGTAGCTGCATATGGGGAAACAAAAAGGAGGTTTAGATGA 1041 0.463 MSTHGSYSMRSKASFENEAKATVKESGGGGSGGKSGKTMSSNSKENLFICFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVFSYISIVFFKVVPQQMIKSRSQFMKIATLSLVFCASVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWVTYAALVPVVAGVVIASGGEPGFHLFGFVMCLSATAARAFKSVLQGLLLSSEGEKLNSMNLLLYMSPIAILVLLPAALIMEPNVVDVTLTLTKDHKSMWLLLFLNSTTAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTIVGMGGYTITVMGVAAYGETKRRFR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01910 346 PANTHER SOLUTE CARRIER FAMILY 35 51 341 - -
Vian2g01910 346 Pfam Triose-phosphate Transporter family 49 338 IPR004853 -
Vian2g01910 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01910 Vian-Chr2 38176305 38179181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01910 40 346 Organic Solute Cotransporters AT5G04160 80.782 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01910 - - gmx:100782949 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01910 2 38176305 38179181 Vian2g01910 2 38176305 38179181 ECH