Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01909 ATGAATGCGACTTCTACTTTGGGTGTGGCCCAGGTAATCATTGTTTCTTACTCCCTGACGCTTGGCATTTTTTGTGTTGTCCTTGTGTTGTTTTTACTCTGGCTTTCTGTTAATTTTGTAGATGTTATAGAGGAGGACGCGTTGAACATGGAATCCTGTATTCGGGTTTTGAGAATATTGATCACCAAGGCGGATACTGAGATTGAGGAACTTGAAAGAGATCTCTTGGTGCTTCAGAAGGAGTTGGCCTGTTTTGAGCATGAAAAATGGCCTGATATATTCTGTGGTGTTCTCAGTGAGAGAATCAGCCAGCTTGATGTGGCGATTAGGACTTTAAAGAATGATTGTGCTGATGAGGCTGAAGTGCAGTTACTGCTAGATAGTGAACCTGCTGGGACGCTTCATGAAATACTTGCCCAGTATCTAGATGTGAATGTCTTGAGTCCAGTTGTGAATGTTACTGAACATGCACCAGACAAAGATTCTAGCACCCTTAATATGATCATTAAGGACGAAGGACAAGATCTTCATGGAACCTCAGAAAGCTCTGGAAGCTTGGAACTTATTTTGGAGATTCAGAAGTCAGATAATCCGGAAAAGATTGAGGAACTATCTGAAGAAACACTTGTTAGAAGTCCTGATTTGGCGGGCATTATCCTTGCATCCTACCACTCTGATGGTATAAAATTATCAGAAACATTTGATGATCAAGTTGCTGGAAATGAAGTCAGAAAAAGCCAACTCATTAATTCAAATACAGGTCAAATGTTGGATTTGTTTTCGGCCAAAAGTGAAGCCAAGGTGCAGGAAAAAGAAAATGAATTTGTCAGAGAAAAAGATGTTAGCCCAGATGAATTTAGGCCTGCAATTGACATCAATGGGAAGAAAACGGGTCCACATTCCATATTAGATACTTCACAACGACAAAAACGAGCAAAACCTAATTTAGACAAAGAACCATGTGATTTTGCTCCAAAAGCTGCACAAAGGGACTGCAAGAAAGAACCCAAGGTTGCTCCAGACGAAGATTTGAACTCCCTGAATTACCCTTTACAAGTTGTTTATCCTAAAACATTATGTATCACTGATACAGAATTTTGCTCCGTTAAAGATAGCAATGGGATGCATACCAAGAGTTCATTGTATACTGGGTTACAGCTGATGGATGTAGATGAAGATAAAGGGAAAGAACATGAACAAGACCTTAAATCCCAACTGAGAACTAACCTCAGAAAGTCCAAGATGAGTTTCCCTTCAAAGCTTAAAGCTTCGGAAAAGAAGGAACTGGAACTAAAGGCATTTTCTTCCAGAGAACCATTTGACAGTTGTACGGAAGTTATTCCAAGTGCATCCATAGTTGTATCAGCTAAGAGCCAGCGAAGATCCAAATCCTGTACTGATGTTACCATTTTAAACGAGTCAATGAAGCGGAAGATTATTACTAAAGGGGCAGTGAAACCAGACAAGCATGAGACTGAAGGTCGTGCTATTGTTCTTTATGACAGTAAATTTTCTGAATTACAAAAGAAAAGAAGAGTTACAAAGTTGCCTATCACCGTGGACATACAAAATTCAAGTGTTAATTTGGACGTACCAAATTCAGACGGGGTTTCTATGGACAAAAAAAGCAAGTTAGCTCCTCGTACTCACAAGTCACATTCCTTGGTGGATTCTCATGATGAGACCTTATCTTTGAATAGCTTGTCATTGACTGATTTGAGGGCTATGGCAAAGGAACACAATGTGAGAAAATATTATAAGCTTCGAAAAGTAGATTTGGTTGAACAGTTAGCTCAGCGACTGAGTAGCTGCTGA 1815 0.3972 MNATSTLGVAQVIIVSYSLTLGIFCVVLVLFLLWLSVNFVDVIEEDALNMESCIRVLRILITKADTEIEELERDLLVLQKELACFEHEKWPDIFCGVLSERISQLDVAIRTLKNDCADEAEVQLLLDSEPAGTLHEILAQYLDVNVLSPVVNVTEHAPDKDSSTLNMIIKDEGQDLHGTSESSGSLELILEIQKSDNPEKIEELSEETLVRSPDLAGIILASYHSDGIKLSETFDDQVAGNEVRKSQLINSNTGQMLDLFSAKSEAKVQEKENEFVREKDVSPDEFRPAIDINGKKTGPHSILDTSQRQKRAKPNLDKEPCDFAPKAAQRDCKKEPKVAPDEDLNSLNYPLQVVYPKTLCITDTEFCSVKDSNGMHTKSSLYTGLQLMDVDEDKGKEHEQDLKSQLRTNLRKSKMSFPSKLKASEKKELELKAFSSREPFDSCTEVIPSASIVVSAKSQRRSKSCTDVTILNESMKRKIITKGAVKPDKHETEGRAIVLYDSKFSELQKKRRVTKLPITVDIQNSSVNLDVPNSDGVSMDKKSKLAPRTHKSHSLVDSHDETLSLNSLSLTDLRAMAKEHNVRKYYKLRKVDLVEQLAQRLSSC 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01909 604 MobiDBLite consensus disorder prediction 541 558 - -
Vian2g01909 604 MobiDBLite consensus disorder prediction 531 558 - -
Vian2g01909 604 MobiDBLite consensus disorder prediction 273 291 - -
Vian2g01909 604 Coils Coil 54 88 - -
Vian2g01909 604 Pfam Rho termination factor, N-terminal domain 565 600 IPR011112 GO:0006353
Vian2g01909 604 SMART Rho_N_2_a 564 603 IPR011112 GO:0006353
Vian2g01909 604 MobiDBLite consensus disorder prediction 306 320 - -
Vian2g01909 604 MobiDBLite consensus disorder prediction 273 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01909 - - vum:124846858 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01909 2 38159747 38163725 Vian2g01909 2 38159747 38163725 ECH