Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01870 ATGGCTCAATTGCTATCATCCTCTTACTCCTTGACTATCTGCTCTAGAAATAAACCTTACTTAAAACCTGTTAAGCAATGCTCGACACCATTTTCAATAGCGGTTTCTTCCAATAATTCTAAACCTTCATCTAGAGGGTTTTTCTTGCAAGAACAGAAGCTAAGAAAACATTCTCTATCAGTACATGCTGCTGCAGTTTCAACTAGCCAGGAAACCCCAGTTCAAACTAGCTCTGGTAATCCTTTTAAACCACAGAGAGTCATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCAACTGCTCTCCACCTTTCTAACAAGGGCTATGAGGTTGCCATTGTTGACAGTCTTGTGCGACGCCTTTTTGATCACCAGCTTGGACTGGAGTCTCTAACACCAATTTCCTCCATCCAGAATCGTCTTCAGTGTTGGAAATCTCTCACTGGAAAAAATATTGAGCTCTACATTGGAGACATATGTGATTTTGAGTTCTTATCTGAAACCTTCAAGACATTTGAACCTGATGCTGTTGTCCACTTTGGGGAACAACGGTCTGCTCCTTACTCTATGATAGATCGGTCAAGAGCTGTGTATACCCAACAAAACAACGTTGTTGGGACACTGAATGTGCTCTTTGCCATAAAAGAGTTCAGAGAGCAGTGTCATCTAGTTAAGCTTGGGACCATGGGTGAATATGGGACCCCAAATATTGACATTGAGGAAGGTTACATTACCATTACTCACAATGGAAGAACAGACACGTTGCCATATCCCAAACAAGCTAGCTCATTCTATCATCTAAGCAAGGTACATGATTCACATAACATAGCTTTCACTTGCAAAGCTTGGGGCATTCGAGCAACTGACTTGAATCAAGGAGTGGTATATGGGGTAAGGACAGATGAGACTGCACTGCACGAAGAGCTGTATAACAGGTTTGATTACGATGGAATATTTGGAACTGCATTGAACCGGTTCTGTGTTCAGGCTGCTGTTGGTCATCCTCTGACTGTGTATGGTAAAGGAGGCCAGACTAGGGGCTTCCTTGACATAAGAGATACAGTTCAATGTGTTGAGCTTGCTATTGCAAACCCTGCGAAGCCAGGGGAGTTCCGAGTCTTCAACCAATTCACTGAGCAGTTTTCAGTGAATCAGCTTGCCGACCTTGTTACCAAAGCTGGTGAGAAGCTGGGCCTTGATGTGAAAACTATCCATGTGCCTAATCCAAGAGTTGAGGCAGAAGAGCATTACTACAATTGCAAGAACACTAAACTTGTTGATCTGGGACTCAAACCACACTTTCTTTCAGATTCTCTCCTTGATTCAGTGCTGAACTTCGCTGTTCAGTACAAGGACCGTGTTGACACTAAACAAATTATGCCTAGTGTGTCTTGGAAAAAAATTGGAGTCAAAACAAAAACTGTTACAGCCTAA 1434 0.4282 MAQLLSSSYSLTICSRNKPYLKPVKQCSTPFSIAVSSNNSKPSSRGFFLQEQKLRKHSLSVHAAAVSTSQETPVQTSSGNPFKPQRVMVIGGDGYCGWATALHLSNKGYEVAIVDSLVRRLFDHQLGLESLTPISSIQNRLQCWKSLTGKNIELYIGDICDFEFLSETFKTFEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVVGTLNVLFAIKEFREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETALHEELYNRFDYDGIFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFSVNQLADLVTKAGEKLGLDVKTIHVPNPRVEAEEHYYNCKNTKLVDLGLKPHFLSDSLLDSVLNFAVQYKDRVDTKQIMPSVSWKKIGVKTKTVTA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01870 477 CDD SQD1_like_SDR_e 86 466 - -
Vian2g01870 477 Gene3D - 293 454 - -
Vian2g01870 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 456 IPR036291 -
Vian2g01870 477 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 83 465 - -
Vian2g01870 477 Pfam NAD dependent epimerase/dehydratase family 87 374 IPR001509 -
Vian2g01870 477 Gene3D - 86 377 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01870 40 476 Acyl Lipid Metabolism Gene Families AT4G33030 82.877 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01870 K06118 - gmx:100816616 905.975