Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01863 ATGGCTACAATAGCTGTCAGGATTCTCGGTTCCAATTCGCGAACCGCCCTCCGTCGCTGGTGTCGCTCCTCTTACTCCTCTACCTCCGCAGCGGTGGCGGAAGCGGAGAGCACGGAGGTGAAGGACTACGCCGATTACCGGCGCTCCCTATACGGACAGATCACCCACAAGGCGCTCCTCGTCGACGCCGTTGGCACGCTCGTCCTCCCCTCGCAACCCATGGCTCAGATTTATAGGACGATTGGCGAAAAGTATGGTGTGGAGTACTCGGAGGATGAAATACTGTTTAGATACAGAAGAGCATATGGGCAGCCTTGGGGAAAATCTCGTCTCAGATATGTTAATGATGGTAAGCCCTTCTGGCAATACATAGTTAGTTATTCCACCGGCTGTTCAGATCCTCAATACTTTGAAGAACTTTATAACTATTATATGACGGACAAGGCATGGCACCTCAATGATCCCAGAGCAGAAGAAGTATTTAGAGCTCTTCGAAAATCAGGTGTGAAATTAGCTGTTGTATCAAATTTTGACACTAGGTTAAGACCTCTCCTGCGGGCATTAAATTGTGACACTTGGTTTGATGCGGTAGCAGTGTCAGCTGAGGTTGCGGCCGAAAAACCAAATCCAACTATATTTCTTAAAGCATGTGAACTATTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGATCGCAGAAATGATATATGGGGTGCCAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGCGATGTTCACTCTTTTAAGGAGGTAGCACAGAGGATTGGGGTTCAGGTCTGA 810 0.484 MATIAVRILGSNSRTALRRWCRSSYSSTSAAVAEAESTEVKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRTIGEKYGVEYSEDEILFRYRRAYGQPWGKSRLRYVNDGKPFWQYIVSYSTGCSDPQYFEELYNYYMTDKAWHLNDPRAEEVFRALRKSGVKLAVVSNFDTRLRPLLRALNCDTWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVAQRIGVQV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01863 269 SUPERFAMILY HAD-like 57 260 IPR036412 -
Vian2g01863 269 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 57 251 - -
Vian2g01863 269 NCBIfam HAD-IA family hydrolase 146 247 IPR006439 -
Vian2g01863 269 PANTHER - 17 268 - -
Vian2g01863 269 NCBIfam HAD hydrolase, REG-2-like, family IA 57 250 IPR011949 -
Vian2g01863 269 NCBIfam HAD-IA family hydrolase 164 245 IPR006439 -
Vian2g01863 269 Gene3D - 60 253 IPR023214 -
Vian2g01863 269 SFLD Haloacid Dehalogenase 57 251 - -
Vian2g01863 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 212 232 IPR006439 -
Vian2g01863 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 56 67 IPR006439 -
Vian2g01863 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 164 177 IPR006439 -
Vian2g01863 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 194 210 IPR006439 -
Vian2g01863 269 CDD HAD_dREG-2_like 157 268 - -
Vian2g01863 269 Pfam Haloacid dehalogenase-like hydrolase 65 248 IPR041492 -
Vian2g01863 269 Gene3D - 72 145 IPR044924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01863 Vian-Chr2 37453333 37457121 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01863 - - pvu:PHAVU_001G126300g 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01863 2 37453333 37457121 Vian2g01863 2 37453333 37457121 ECH