Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01859 ATGAACCCAGGGCTCCTTGCAGCTGCAACCTTGCTTGCCCTCTTAGCCATCACCTTCTCCTTCTTCAACCCTCTAGCCCTGTTTTCTCCGCCCCATGTTCCGGGATCCAAGGATCACCTCCACGCAGCGCGGATACTCCATGTCTCCGGCGCCGTCGGCCCTGAAAGTCTTGTTTTTGACGCTCACGGCGGAGGGCCCTACACCGGCGTCGCCGACGGACGGATTTTGAAGTGGGAAGGCGAGCAGCAGGGCTGGACTGAATTTGCTTTCACCAGTTCCAATAGGTTTATTGTTACCTTGAAGAAAGGTCCTTTCCCAGTTGTGGAACAGTGTAGAGTTGCTCTAACACACTGTTATCATGTCTGGCTTTTATATGCTTTAAGGGGAATTCTGCTTGGTAGGTCGAATTGTGTTCGTCCATTTGCACCAGAGTTGGAGCATGTTTGTGGGAGGCCTTTAGGACTAAAGTTTGATAAGAAAACTGGAGATCTATACATTGCTGATGCCTATCTGGGCCTAAAAGTAGTGGGATCTGCAGGGGGTTTGGCCACGGAAGTGGTAACAGAAGTTGAAGGCCAGCCCTTGCAGTTCACCAATGACATGGACATCAGTGAGGATGAAGATGTGATTTACTTTACTGACTCAAGCACAATCTTCCGGAGAAGGCAATTTATGCTTGTACTCCTTAGTGGAGACAGGAGCGGTAGGTTAATGAAATATGACAAGTCAACAAAGGAAGTGAAGGTTTTATTACGTGACATTGCTTTTGCCAATGGTGTTGCTTTAAGCAAAGATGGATCTTTCGTTCTGGTAGCTGAAACCACTACTTGCAAGATCTTGAAACTATGGCTTCGTGGACCCAAGGCTGGTGAAGTGGATACTTTTGCCGAACTACCTGGTTTTCCAGATAATATTAGAAGAAATTCAGAAGGTCACTTTTGGGTAGCTCTGCATGCAAAGGGAAGCCCTTTTGCGAAATGGGTTTCCTCCAATCCATGGGCGGGAAAGTTGATGCTAAAGATTGGCTTTAACTTCAAACAATTGCACTCATCAGTTGCAGGGTGGAAGGCTCATGCTGCTGCCGTAAAGCTAAGTGAGAGAGGAGAGATACTAGAAGTCTTGGAAGATTGTGAAGGGAAGACCTTAAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGTAAGCTTTGGATTGCATCTGTGTTGATGCCTTTCATTGGCATTTATAGTTTGTGA 1233 0.4672 MNPGLLAAATLLALLAITFSFFNPLALFSPPHVPGSKDHLHAARILHVSGAVGPESLVFDAHGGGPYTGVADGRILKWEGEQQGWTEFAFTSSNRFIVTLKKGPFPVVEQCRVALTHCYHVWLLYALRGILLGRSNCVRPFAPELEHVCGRPLGLKFDKKTGDLYIADAYLGLKVVGSAGGLATEVVTEVEGQPLQFTNDMDISEDEDVIYFTDSSTIFRRRQFMLVLLSGDRSGRLMKYDKSTKEVKVLLRDIAFANGVALSKDGSFVLVAETTTCKILKLWLRGPKAGEVDTFAELPGFPDNIRRNSEGHFWVALHAKGSPFAKWVSSNPWAGKLMLKIGFNFKQLHSSVAGWKAHAAAVKLSERGEILEVLEDCEGKTLKFISEVEEKDGKLWIASVLMPFIGIYSL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01859 410 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 103 410 - -
Vian2g01859 410 Pfam Strictosidine synthase 199 286 IPR018119 GO:0009058|GO:0016844
Vian2g01859 410 SUPERFAMILY Calcium-dependent phosphotriesterase 25 405 - -
Vian2g01859 410 Gene3D - 38 410 IPR011042 -
Vian2g01859 410 PANTHER STRICTOSIDINE SYNTHASE-RELATED 12 403 - -
Vian2g01859 410 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01859 Vian-Chr2 37423239 37425495 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01859 - - gmx:100815025 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01859 2 37423239 37425495 Vian2g01859 2 37423239 37425495 ECH