Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01857 ATGTCAAGTGGATCAGTGAGACGGGTTTCCCGTCAAGATATTCAGCTGGTGCAAAATCTCATAGAACGGTGTCTGCAATTATATATGAGCCAGAAAGAAGTCGTGGAAACACTACTAGCTCAAGCAAAAATAGAGCCTGGTTTCACTGAACTAGTTTGGCAAAAGCTTGAAGAAGAAAATGAAGAGTTCTTCAAGGCTTATTATGCAAGATTGGTTTTGAAGCAGCAAATATTGCAATTCAACAAATTGCTTGACCAGCAAGTCCAATTAATGCAGTTACACTCAACTGCTGTTGCCTCACTGCCTACAACTAATGGGTCACACATCCCTGCTGTTTCGTCACTGCCTAACTCAAATGGATCACATATCCCTGGAATACCGGAGAATCCATCATGCTACACTGCAGACCGAACCCAAACAAGTTTGAAGCCAGAAAATATGCAACATCCTGTTGATTCCAGATTATCTAGTGTGTTTAATAATGGTGGGTCATCACTACATACAAATATGCATGCTGCAGTTGATATGTCAGCTCATGGCAATAGGATTAATGGTCCTCCGAGCATGCTTTCTGCTCAAAACGCAAACATGGGTCTGATACAAGGAATCAACGGTGGGATGATTAAATCTGAACCTGGATATTCTGGTTGTTCTCCTTACATGTTTGGTACTGATGGAAATGTCCTGGAGCCACGCCCAGCTATTGGTGGCAGTTCAGTTACATCATTCACTAATGTCGAGTCCAACTCACATTCTTTGAACGATGCAGTCCTAGATCCAGACACTTCTTCATTTGGATTTCTGGGGCAGATTCCCAGAAATTTTAGCCTTTCAGATCTGACTGCCGATTTTTCTCAGAGTTCTGATATACTGGAGACCTATTCTAGGTCACCCTTCCTAGCTACGGATAATGAAAACTTCCTCGACAGAGGAGAACAAGACAATAATAGGCTAGACTCCATATCAGAAGGTTTAAGTTATGAGGACTTTGGGAGTGAATAG 1002 0.4212 MSSGSVRRVSRQDIQLVQNLIERCLQLYMSQKEVVETLLAQAKIEPGFTELVWQKLEEENEEFFKAYYARLVLKQQILQFNKLLDQQVQLMQLHSTAVASLPTTNGSHIPAVSSLPNSNGSHIPGIPENPSCYTADRTQTSLKPENMQHPVDSRLSSVFNNGGSSLHTNMHAAVDMSAHGNRINGPPSMLSAQNANMGLIQGINGGMIKSEPGYSGCSPYMFGTDGNVLEPRPAIGGSSVTSFTNVESNSHSLNDAVLDPDTSSFGFLGQIPRNFSLSDLTADFSQSSDILETYSRSPFLATDNENFLDRGEQDNNRLDSISEGLSYEDFGSE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01857 333 NCBIfam TIGR01589 domain 14 69 IPR006476 -
Vian2g01857 333 PANTHER OS02G0137100 PROTEIN 11 290 IPR006476 -
Vian2g01857 333 Pfam Plant protein 1589 of unknown function (A_thal_3526) 17 69 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01857 Vian-Chr2 37375214 37383478 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01857 - - gmx:100787548 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01857 2 37375214 37383478 Vian2g01857 2 37375214 37383478 ECH