Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01851 ATGGATACTTTGCTCAAAACACCAAACAAGCTTGAGTTTTTGCACCCACTTCACGGTTATTCAGAGAAATTAAGCGGTTTAGGCTCCTCTAGGGTGCAAAATCAGGATTTTAGGTTTGGTTCTAAGAAACCACTTGTGAGATGGGGTAAATGTGGTGGTTTGCGGGCCAGTAGCAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTTTGTATGATTCCTCAAAGGGGGCTGTGGTGGACCTTGCTGTTGTGGGAGGGGGACCTGCTGGGCTTGCAGTTGCGCAGCAGGTTTCTGAGGCAGGGCTTTCAGTTTGTGCTATTGATCCAAACCCTAGGTTGATTTGGCCCAATAATTATGGGGTTTGGGTGGATGAGTTTGAGGCCATGGATTTACTCGACTGCCTTGACACCACCTGGTCCGGCGCAGTTGTCTACATCGACGATAAAACGAAGAAGGATCTTGATAGGCCTTATGGTAGGGTGAATAGGAAGCTGCTGAAATCGAAGATGCTGCAGAAATGTATCTCAAATGGTGTCAAGTTTCACCAGGCCAAAGTTATCAAGATTATTCACGAGGATACCAAATCTTTGCTGATTTGTAATGATGGTGTCACTGTTCAGGCTACTGTGGTTCTTGATGCAACTGGGTTTTCAAGATGCTTGGTTCAGTATGATAAACCGTATAACCCGGGTTACCAAGTGGCTTATGGGATTCTGGCTGAGGTTGATGAACACCCGTATGATGTAGATAAAATGCTTTTTATGGACTGGAGAGATTCTCATCTGGACAATGACAAGGAGCTGAAGCAGAGAAATGATAGAATACCCACTTTTCTGTATGCAATGCCCTTTTCATCCACTAAGATATTTCTTGAAGAAACCTCCCTTGTAGCACGGCCTGGATTACGAATGGATGATATACAAGAAAGAATGGTTGCTAGGTTGAGACATTTGGGTATTAGAGTGAAAAGTATTGAAGAAGATGAGCACTGTGTCATTCCCATGGGTGGCCCACTCCCAATTCTTCCCCAAAGGGTTGTTGGCATTGGTGGTACCGCTGGGATGGTGCATCCTTCAACTGGGTATATGGTTGCAAGGACCCTGGCTGCAGCTCCTATTGTTGCTAATTCTATTGTTCAGAGTCTGGGCTCTGATAGAGGTCTCTCCGGAGGAGATATATCTGCACAAGTGTGGAAAGATTTATGGCCCATCCAAAGGCGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAACTTGATTTACCTGGCACAAGGAGATTTTTTGATGCCTTTTTTGATCTGGAACCGCATTACTGGCATGGATTCTTGTCATCAAGACTGTTTCTTCCTGAGCTCTTATTTTTTGGACTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCGAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGGTAAAAGATACAGAATGA 1515 0.4409 MDTLLKTPNKLEFLHPLHGYSEKLSGLGSSRVQNQDFRFGSKKPLVRWGKCGGLRASSSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKIIHEDTKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPYDVDKMLFMDWRDSHLDNDKELKQRNDRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMVARLRHLGIRVKSIEEDEHCVIPMGGPLPILPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQSLGSDRGLSGGDISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELLFFGLSLFSYASNTSRIEIMAKGTLPLVNMINNLVKDTE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01851 504 Gene3D - 86 441 IPR036188 -
Vian2g01851 504 NCBIfam lycopene cyclase family protein 89 484 IPR010108 GO:0016117|GO:0016705
Vian2g01851 504 SUPERFAMILY FAD/NAD(P)-binding domain 88 471 IPR036188 -
Vian2g01851 504 FunFam lycopene epsilon cyclase, chloroplastic 85 423 - -
Vian2g01851 504 PANTHER - 57 499 - -
Vian2g01851 504 Pfam Lycopene cyclase protein 89 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01851 Vian-Chr2 37281171 37282685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01851 K06443 - gmx:100810895 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01851 2 37281171 37282685 Vian2g01851 2 37281171 37282685 ECH