Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01843 ATGCGCACCACCAGCGTGCAACAACGCGCCCCCACAAAGAAAACCAGACCCAAGAAGAAGACCACCCCACACCCTGTCAAAGTAGTGTACATATCCAACCCCATGAAAATCAAAACCAGCGCCTCCGAGTTTCGTGCCCTCGTGCAAGAACTAACCGGCCAGGACGCCCAGTCGCCGCCTAACCCCACACGCTTCCACGCGCTCGATTCCTCCGATGATTCCTCTTCTGACAAGGTTACCAATGTTGACGACCATTTCATCCCTCTCCCAAAGGATCCCAACAATTCCGTACAACAGCTTCAACACCAGCCGCAACCCTCTTCTTCCTTTGAGGCTCCGGACGACGACGTTTTCACTCCCCAGATGATAGAGAGCATTTCCTCCCTGCTTCCTGCAAGTCTATTCTATGAATCTCCCCATCTTAATTACTGGTGA 435 0.5264 MRTTSVQQRAPTKKTRPKKKTTPHPVKVVYISNPMKIKTSASEFRALVQELTGQDAQSPPNPTRFHALDSSDDSSSDKVTNVDDHFIPLPKDPNNSVQQLQHQPQPSSSFEAPDDDVFTPQMIESISSLLPASLFYESPHLNYW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01843 144 MobiDBLite consensus disorder prediction 1 29 - -
Vian2g01843 144 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 3 141 IPR039335 GO:0051091
Vian2g01843 144 MobiDBLite consensus disorder prediction 48 69 - -
Vian2g01843 144 Pfam VQ motif 31 57 IPR008889 -
Vian2g01843 144 MobiDBLite consensus disorder prediction 48 115 - -
Vian2g01843 144 MobiDBLite consensus disorder prediction 92 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01843 Vian-Chr2 37128695 37129129 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01843 - - gmx:102661022 157.532