Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01839 ATGCGTCAAAGCAACGAACTCTGTACAAAACTTCAAAGTTTTAAATTTTCTGTCATGGCAATTCTCAAGATTACCAAAAAGCACCATAAGCATTTCAACAACCCTTTCCCTTCTTCAGTTTCAACCACCATCCCTTATGTCCAAGGTTCTCTCTTCTTCAATTCCAAAAGAGTTCCTTCGGATCAGACCTTCTCAATTGGCAGTGATTTTCAGCTTTCTTGGACCTCCGACAATGGAGGGCACCTCTCGATTTCGCACCTTTCTCAACAAACCAGACCCATTTGGTCTACTATCCCTGGACAGGCTTTTGTCTCGGCTGCACTGGTTGACACAGAATTGGAAGAAAGTAGAGGATCCTTTCTTGTCAAAGATAAAGATGTTCATATGGTTTGCAATCACCAAACCATTGAGGATATTAGGATCATTGAGGATATTGGGGTGATCAATGGTCAATTTGATCATCATTTGGAATGTGAAATGCCAGATTCTACTTCTGTGTATCGAAGGTTGGAAAAGAAAACTGATGCTCAAGAGATTCCGATTCCTACTTTGATGATCACAGGAAGGCTTTTCAATATGACTAAGAAGAGTAAAAGGTTTCAAAAGCATGGCATTCAAGCAACTATGCAGTTTGAGGCAAAAGGACCTTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTTGGGTTTCAAGTGAAGATTGAGAAACCTAACTTCACCTCCCGCAACCAAGTCTCTAAAACAGTTTCAGGAGGGTACCAGGGCTTCAAGAGGGGACGGAATAATAGGAAAAAGAGACTGGGTTGGTGTTGGTACCTTTCTAGGCCAAGAGGGTTTTTGCTAGTCTCTTCAGTGGAGGAAGAGATAGCAGACTTGGATATTCTAAAACCAGAAGAGTTCAATAGAGTGTGGTTGACATATGCAAGTGATGAGAATGAGAGGTTTTATGGCTTTGGGGAGCAATTTTCTCACATGAACTTCAAAGGCAAAAGGGTGCCCATATTTGTTCAAGAACAAGGTATTGGCAGAGGAGATCAACCCATAACCCTGGCTGCTAACTTGATTAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCCTTCTACATAACGTCAAGAATGAGGTCTGTCTGGCTTGAAGGATATGATTATACTGTTTTCGATCTTACTAAACTAGACAGAGTACAGATACAGATACATGGAAACTCTGCTGAAGGGAGGATATTGCATGGAAACTCACCTTGTGAACTGATTGAACGTTTCACAGAAAGCATTGGAAGGCTACCTGAGCTTCCAGAATGGATTATATCTGGTGCAATAGTTGGAATGCAAGGTGGCACTGATGCTGTACGTCATATCTGGGATGAACTAAGGACCTATGATGTTCCTATCTCGGCATTTTGGTTGCAGATTTCTAACTCAACTGGATTGGGTGGGGCAGAGAAAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATTCACAAAGGTTGATGAGAAACAAAACAAAAGGAGAAACCTCTTTGAGGAGGCAAAACAGTTGGACATATTGGTAAAAGACAGCAATGGAAATCCATACATGGTTCCAAACACGGCTTTTGATGTAGGAATGCTAGATCTAACGCACCCAAAAACTGCAACTTGGTTCAAGCAAATTCTTGGAGACATGGTGAATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAGGGCCTTCCTGTTGATGCTGTTTTATACTCAGGTGAAGATCCCATTTCAGCTCATAACAGATACCCGGAACTATGGGCCAAAATTAACAGAGAGATTGTGGAAGAATGGAAAAGTAACTCCTTGGACAAGGTAAAGAAAGACCAAGAAGAAGGTTTGGTTTTCTTCATGAGAGCTGGTTTTAGAGATAGCCCTAAGTGGGGGATGTTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAAGAAATGATGGAATAAAGAGCTCTGTTGTTGGCCTTCTGAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGATATTGTACAGTAAACTTACCTATAGTCAAATATAATAGAAGTGAAGAATTGCTTTTGCGGTGGATGGAGCTAAATTCTTTCACCATAGTCTTCCGTACCCATGAAGGAAACAAACCATCCTGCAACAGCCAGTTTTACTCAAACCAGCAGACAATGTCACACTTTGCACGTTTTGCAAAAGTATACAAAGCATGGACATTTTATCGAATTCAGCTGGTTAAGGAAGCTGCCCAGAAAGGATTGCCTGTATGCCGCCATCTATTTCTCCATTATCCGACTGATGAACGCGTGCAACGTTTGAGTTATCAGCAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTTCCTGTCCTTGACAAAGGAAAGAGAAAAGTTAGAGCTTATTTTCCATTGGGGGAGAGTAGCAGTTGGGTTCATATATGGACAGGAAAAGTATTTTCCAAACAAGGAAGTGAAGAATGGGTAGAAGCTCCAATAGGATATCCTGCTGTATTTGTTAAGGTTGGCTCTCATGTTGGAGAAATTTTTTTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2634 0.4153 MRQSNELCTKLQSFKFSVMAILKITKKHHKHFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFSIGSDFQLSWTSDNGGHLSISHLSQQTRPIWSTIPGQAFVSAALVDTELEESRGSFLVKDKDVHMVCNHQTIEDIRIIEDIGVINGQFDHHLECEMPDSTSVYRRLEKKTDAQEIPIPTLMITGRLFNMTKKSKRFQKHGIQATMQFEAKGPSVYARYWVLFNQKTNHEVGFQVKIEKPNFTSRNQVSKTVSGGYQGFKRGRNNRKKRLGWCWYLSRPRGFLLVSSVEEEIADLDILKPEEFNRVWLTYASDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLISYRAGGDWSTTYAPSPFYITSRMRSVWLEGYDYTVFDLTKLDRVQIQIHGNSAEGRILHGNSPCELIERFTESIGRLPELPEWIISGAIVGMQGGTDAVRHIWDELRTYDVPISAFWLQISNSTGLGGAEKNIDWFTALVELGSGFTKVDEKQNKRRNLFEEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTATWFKQILGDMVNDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINREIVEEWKSNSLDKVKKDQEEGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQRNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYNRSEELLLRWMELNSFTIVFRTHEGNKPSCNSQFYSNQQTMSHFARFAKVYKAWTFYRIQLVKEAAQKGLPVCRHLFLHYPTDERVQRLSYQQFLVGSEFLVVPVLDKGKRKVRAYFPLGESSSWVHIWTGKVFSKQGSEEWVEAPIGYPAVFVKVGSHVGEIFLNNLRSLGIL 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01839 877 CDD GH31_N 306 436 - -
Vian2g01839 877 Gene3D Glycosidases 423 805 - -
Vian2g01839 877 SUPERFAMILY Galactose mutarotase-like 303 424 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vian2g01839 877 SUPERFAMILY Glycosyl hydrolase domain 774 858 - -
Vian2g01839 877 Gene3D - 806 858 IPR013780 -
Vian2g01839 877 Coils Coil 510 530 - -
Vian2g01839 877 PANTHER SULFOQUINOVOSIDASE 508 876 - -
Vian2g01839 877 Pfam Glycosyl hydrolases family 31 419 861 IPR000322 GO:0004553|GO:0005975
Vian2g01839 877 Gene3D glycosyl hydrolase (family 31) 269 420 - -
Vian2g01839 877 SUPERFAMILY (Trans)glycosidases 427 772 IPR017853 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01839 317 849 Glycoside Hydrolase AT3G45940 23.183 1.25e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01839 - - var:108329550 1674.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01839 2 37000530 37005277 Vian2g01839 2 37000530 37005277 ECH